Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps13aQ5H8C4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps13aQ5H8C4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Vps13aQ5H8C4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vps13aQ5H8C4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.04■□□□□ 0.8
Vps13aQ5H8C4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vps13aQ5H8C4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vps13aQ5H8C4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps13aQ5H8C4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps13aQ5H8C4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vps13aQ5H8C4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps13aQ5H8C4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps13aQ5H8C4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vps13aQ5H8C4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps13aQ5H8C4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps13aQ5H8C4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps13aQ5H8C4 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.03■□□□□ 0.8
Vps13aQ5H8C4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps13aQ5H8C4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vps13aQ5H8C4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Vps13aQ5H8C4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps13aQ5H8C4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps13aQ5H8C4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps13aQ5H8C4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps13aQ5H8C4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.02■□□□□ 0.8
Vps13aQ5H8C4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps13aQ5H8C4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Vps13aQ5H8C4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Vps13aQ5H8C4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.01■□□□□ 0.79
Vps13aQ5H8C4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps13aQ5H8C4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps13aQ5H8C4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps13aQ5H8C4 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vps13aQ5H8C4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps13aQ5H8C4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vps13aQ5H8C4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps13aQ5H8C4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vps13aQ5H8C4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps13aQ5H8C4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vps13aQ5H8C4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vps13aQ5H8C4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20■□□□□ 0.79
Vps13aQ5H8C4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20■□□□□ 0.79
Vps13aQ5H8C4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vps13aQ5H8C4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Vps13aQ5H8C4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Vps13aQ5H8C4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20■□□□□ 0.79
Vps13aQ5H8C4 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20■□□□□ 0.79
Vps13aQ5H8C4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Vps13aQ5H8C4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.99■□□□□ 0.79
Vps13aQ5H8C4 Gm26524-201ENSMUST00000192339 390 ntBASIC19.99■□□□□ 0.79
Vps13aQ5H8C4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Vps13aQ5H8C4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.99■□□□□ 0.79
Vps13aQ5H8C4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps13aQ5H8C4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.99■□□□□ 0.79
Vps13aQ5H8C4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vps13aQ5H8C4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps13aQ5H8C4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vps13aQ5H8C4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps13aQ5H8C4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps13aQ5H8C4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps13aQ5H8C4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps13aQ5H8C4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.98■□□□□ 0.79
Vps13aQ5H8C4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps13aQ5H8C4 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vps13aQ5H8C4 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps13aQ5H8C4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.97■□□□□ 0.79
Vps13aQ5H8C4 Gm10819-201ENSMUST00000099988 561 ntBASIC19.97■□□□□ 0.79
Vps13aQ5H8C4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps13aQ5H8C4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vps13aQ5H8C4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vps13aQ5H8C4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vps13aQ5H8C4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps13aQ5H8C4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Vps13aQ5H8C4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.96■□□□□ 0.79
Vps13aQ5H8C4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps13aQ5H8C4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps13aQ5H8C4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps13aQ5H8C4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.96■□□□□ 0.79
Vps13aQ5H8C4 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.96■□□□□ 0.79
Vps13aQ5H8C4 Gm6365-201ENSMUST00000054711 744 ntBASIC19.96■□□□□ 0.79
Vps13aQ5H8C4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps13aQ5H8C4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps13aQ5H8C4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vps13aQ5H8C4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.95■□□□□ 0.78
Vps13aQ5H8C4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps13aQ5H8C4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps13aQ5H8C4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.95■□□□□ 0.78
Vps13aQ5H8C4 Gm27275-201ENSMUST00000184318 272 ntBASIC19.95■□□□□ 0.78
Vps13aQ5H8C4 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Vps13aQ5H8C4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vps13aQ5H8C4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Vps13aQ5H8C4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps13aQ5H8C4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps13aQ5H8C4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vps13aQ5H8C4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vps13aQ5H8C4 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps13aQ5H8C4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vps13aQ5H8C4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.94■□□□□ 0.78
Vps13aQ5H8C4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vps13aQ5H8C4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms