Protein–RNA interactions for Protein: Q3V053

4933427I04Rik, Riken cDNA 4933427I04 gene, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933427I04RikQ3V053 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.08■■□□□ 1.13
4933427I04RikQ3V053 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.08■■□□□ 1.13
4933427I04RikQ3V053 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
4933427I04RikQ3V053 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
4933427I04RikQ3V053 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
4933427I04RikQ3V053 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
4933427I04RikQ3V053 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
4933427I04RikQ3V053 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
4933427I04RikQ3V053 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.07■■□□□ 1.12
4933427I04RikQ3V053 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
4933427I04RikQ3V053 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
4933427I04RikQ3V053 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC22.07■■□□□ 1.12
4933427I04RikQ3V053 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
4933427I04RikQ3V053 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
4933427I04RikQ3V053 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
4933427I04RikQ3V053 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.06■■□□□ 1.12
4933427I04RikQ3V053 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
4933427I04RikQ3V053 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
4933427I04RikQ3V053 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
4933427I04RikQ3V053 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
4933427I04RikQ3V053 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.06■■□□□ 1.12
4933427I04RikQ3V053 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
4933427I04RikQ3V053 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
4933427I04RikQ3V053 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
4933427I04RikQ3V053 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC22.05■■□□□ 1.12
4933427I04RikQ3V053 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
4933427I04RikQ3V053 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.05■■□□□ 1.12
4933427I04RikQ3V053 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
4933427I04RikQ3V053 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
4933427I04RikQ3V053 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
4933427I04RikQ3V053 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
4933427I04RikQ3V053 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
4933427I04RikQ3V053 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
4933427I04RikQ3V053 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
4933427I04RikQ3V053 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
4933427I04RikQ3V053 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.04■■□□□ 1.12
4933427I04RikQ3V053 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC22.04■■□□□ 1.12
4933427I04RikQ3V053 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.04■■□□□ 1.12
4933427I04RikQ3V053 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
4933427I04RikQ3V053 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
4933427I04RikQ3V053 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.03■■□□□ 1.12
4933427I04RikQ3V053 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
4933427I04RikQ3V053 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
4933427I04RikQ3V053 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
4933427I04RikQ3V053 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
4933427I04RikQ3V053 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
4933427I04RikQ3V053 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
4933427I04RikQ3V053 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
4933427I04RikQ3V053 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
4933427I04RikQ3V053 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
4933427I04RikQ3V053 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
4933427I04RikQ3V053 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
4933427I04RikQ3V053 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
4933427I04RikQ3V053 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
4933427I04RikQ3V053 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
4933427I04RikQ3V053 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.02■■□□□ 1.12
4933427I04RikQ3V053 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
4933427I04RikQ3V053 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
4933427I04RikQ3V053 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
4933427I04RikQ3V053 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
4933427I04RikQ3V053 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
4933427I04RikQ3V053 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
4933427I04RikQ3V053 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
4933427I04RikQ3V053 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
4933427I04RikQ3V053 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
4933427I04RikQ3V053 Gm10493-201ENSMUST00000097270 612 ntBASIC22.01■■□□□ 1.11
4933427I04RikQ3V053 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
4933427I04RikQ3V053 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
4933427I04RikQ3V053 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC22■■□□□ 1.11
4933427I04RikQ3V053 Gm10571-201ENSMUST00000097869 1638 ntBASIC22■■□□□ 1.11
4933427I04RikQ3V053 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC22■■□□□ 1.11
4933427I04RikQ3V053 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
4933427I04RikQ3V053 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
4933427I04RikQ3V053 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22■■□□□ 1.11
4933427I04RikQ3V053 Gm5874-201ENSMUST00000096101 508 ntBASIC22■■□□□ 1.11
4933427I04RikQ3V053 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC22■■□□□ 1.11
4933427I04RikQ3V053 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
4933427I04RikQ3V053 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
4933427I04RikQ3V053 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
4933427I04RikQ3V053 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
4933427I04RikQ3V053 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
4933427I04RikQ3V053 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
4933427I04RikQ3V053 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.99■■□□□ 1.11
4933427I04RikQ3V053 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
4933427I04RikQ3V053 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.99■■□□□ 1.11
4933427I04RikQ3V053 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
4933427I04RikQ3V053 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.99■■□□□ 1.11
4933427I04RikQ3V053 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
4933427I04RikQ3V053 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
4933427I04RikQ3V053 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
4933427I04RikQ3V053 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
4933427I04RikQ3V053 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
4933427I04RikQ3V053 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.98■■□□□ 1.11
4933427I04RikQ3V053 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
4933427I04RikQ3V053 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
4933427I04RikQ3V053 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
4933427I04RikQ3V053 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
4933427I04RikQ3V053 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.97■■□□□ 1.11
4933427I04RikQ3V053 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.97■■□□□ 1.11
4933427I04RikQ3V053 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms