Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Nhej1Q3KNJ2 Mir6236-201ENSMUST00000184437 123 ntBASIC21.13■□□□□ 0.97
Nhej1Q3KNJ2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nhej1Q3KNJ2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nhej1Q3KNJ2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nhej1Q3KNJ2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Nhej1Q3KNJ2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nhej1Q3KNJ2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nhej1Q3KNJ2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nhej1Q3KNJ2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nhej1Q3KNJ2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Nhej1Q3KNJ2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nhej1Q3KNJ2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nhej1Q3KNJ2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nhej1Q3KNJ2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nhej1Q3KNJ2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nhej1Q3KNJ2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Nhej1Q3KNJ2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.12■□□□□ 0.97
Nhej1Q3KNJ2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.12■□□□□ 0.97
Nhej1Q3KNJ2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nhej1Q3KNJ2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nhej1Q3KNJ2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nhej1Q3KNJ2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nhej1Q3KNJ2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.11■□□□□ 0.97
Nhej1Q3KNJ2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nhej1Q3KNJ2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nhej1Q3KNJ2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Nhej1Q3KNJ2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nhej1Q3KNJ2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nhej1Q3KNJ2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Nhej1Q3KNJ2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nhej1Q3KNJ2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Nhej1Q3KNJ2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nhej1Q3KNJ2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nhej1Q3KNJ2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Nhej1Q3KNJ2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nhej1Q3KNJ2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nhej1Q3KNJ2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Nhej1Q3KNJ2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nhej1Q3KNJ2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nhej1Q3KNJ2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nhej1Q3KNJ2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.09■□□□□ 0.97
Nhej1Q3KNJ2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nhej1Q3KNJ2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nhej1Q3KNJ2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nhej1Q3KNJ2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nhej1Q3KNJ2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Nhej1Q3KNJ2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
Nhej1Q3KNJ2 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.08■□□□□ 0.97
Nhej1Q3KNJ2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Nhej1Q3KNJ2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Nhej1Q3KNJ2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nhej1Q3KNJ2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Nhej1Q3KNJ2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nhej1Q3KNJ2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Nhej1Q3KNJ2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nhej1Q3KNJ2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Nhej1Q3KNJ2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nhej1Q3KNJ2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nhej1Q3KNJ2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Nhej1Q3KNJ2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nhej1Q3KNJ2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.06■□□□□ 0.96
Nhej1Q3KNJ2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nhej1Q3KNJ2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Nhej1Q3KNJ2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.06■□□□□ 0.96
Nhej1Q3KNJ2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.06■□□□□ 0.96
Nhej1Q3KNJ2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Nhej1Q3KNJ2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nhej1Q3KNJ2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nhej1Q3KNJ2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nhej1Q3KNJ2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nhej1Q3KNJ2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nhej1Q3KNJ2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nhej1Q3KNJ2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.05■□□□□ 0.96
Nhej1Q3KNJ2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nhej1Q3KNJ2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nhej1Q3KNJ2 Gm43530-201ENSMUST00000195920 274 ntBASIC21.05■□□□□ 0.96
Nhej1Q3KNJ2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nhej1Q3KNJ2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nhej1Q3KNJ2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Nhej1Q3KNJ2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nhej1Q3KNJ2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nhej1Q3KNJ2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nhej1Q3KNJ2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nhej1Q3KNJ2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nhej1Q3KNJ2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.04■□□□□ 0.96
Nhej1Q3KNJ2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.04■□□□□ 0.96
Nhej1Q3KNJ2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nhej1Q3KNJ2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nhej1Q3KNJ2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nhej1Q3KNJ2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nhej1Q3KNJ2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.03■□□□□ 0.96
Nhej1Q3KNJ2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nhej1Q3KNJ2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nhej1Q3KNJ2 Gm9870-201ENSMUST00000063874 645 ntBASIC21.03■□□□□ 0.96
Nhej1Q3KNJ2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.03■□□□□ 0.96
Nhej1Q3KNJ2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nhej1Q3KNJ2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.02■□□□□ 0.96
Nhej1Q3KNJ2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Nhej1Q3KNJ2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms