Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxc4Q08624 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.19■□□□□ 0.66
Hoxc4Q08624 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc4Q08624 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc4Q08624 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.19■□□□□ 0.66
Hoxc4Q08624 Gm42642-201ENSMUST00000200683 355 ntBASIC19.19■□□□□ 0.66
Hoxc4Q08624 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc4Q08624 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc4Q08624 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxc4Q08624 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc4Q08624 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc4Q08624 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc4Q08624 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc4Q08624 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc4Q08624 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc4Q08624 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.18■□□□□ 0.66
Hoxc4Q08624 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Hoxc4Q08624 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc4Q08624 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.18■□□□□ 0.66
Hoxc4Q08624 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc4Q08624 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Hoxc4Q08624 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc4Q08624 Gm10849-201ENSMUST00000100397 618 ntBASIC19.17■□□□□ 0.66
Hoxc4Q08624 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc4Q08624 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc4Q08624 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc4Q08624 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc4Q08624 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.17■□□□□ 0.66
Hoxc4Q08624 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc4Q08624 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc4Q08624 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc4Q08624 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.16■□□□□ 0.66
Hoxc4Q08624 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.16■□□□□ 0.66
Hoxc4Q08624 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.16■□□□□ 0.66
Hoxc4Q08624 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.16■□□□□ 0.66
Hoxc4Q08624 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc4Q08624 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc4Q08624 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc4Q08624 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Hoxc4Q08624 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc4Q08624 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.15■□□□□ 0.66
Hoxc4Q08624 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.15■□□□□ 0.66
Hoxc4Q08624 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc4Q08624 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.15■□□□□ 0.66
Hoxc4Q08624 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc4Q08624 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc4Q08624 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc4Q08624 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Hoxc4Q08624 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.15■□□□□ 0.66
Hoxc4Q08624 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc4Q08624 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc4Q08624 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Hoxc4Q08624 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Hoxc4Q08624 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hoxc4Q08624 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Hoxc4Q08624 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Hoxc4Q08624 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc4Q08624 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc4Q08624 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc4Q08624 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Hoxc4Q08624 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc4Q08624 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc4Q08624 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc4Q08624 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc4Q08624 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Hoxc4Q08624 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc4Q08624 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxc4Q08624 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc4Q08624 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Hoxc4Q08624 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc4Q08624 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc4Q08624 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc4Q08624 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.12■□□□□ 0.65
Hoxc4Q08624 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc4Q08624 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc4Q08624 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxc4Q08624 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxc4Q08624 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.11■□□□□ 0.65
Hoxc4Q08624 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.11■□□□□ 0.65
Hoxc4Q08624 Gm26571-201ENSMUST00000181399 666 ntBASIC19.11■□□□□ 0.65
Hoxc4Q08624 Gm10033-202ENSMUST00000211874 928 ntBASIC19.11■□□□□ 0.65
Hoxc4Q08624 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Hoxc4Q08624 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.11■□□□□ 0.65
Hoxc4Q08624 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Hoxc4Q08624 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.11■□□□□ 0.65
Hoxc4Q08624 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxc4Q08624 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc4Q08624 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc4Q08624 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc4Q08624 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.1■□□□□ 0.65
Hoxc4Q08624 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Hoxc4Q08624 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.1■□□□□ 0.65
Hoxc4Q08624 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.1■□□□□ 0.65
Hoxc4Q08624 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.1■□□□□ 0.65
Hoxc4Q08624 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc4Q08624 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc4Q08624 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hoxc4Q08624 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Hoxc4Q08624 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Hoxc4Q08624 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms