Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Sox4Q06831 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox4Q06831 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox4Q06831 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox4Q06831 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox4Q06831 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox4Q06831 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox4Q06831 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.5■□□□□ 0.71
Sox4Q06831 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox4Q06831 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.5■□□□□ 0.71
Sox4Q06831 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox4Q06831 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox4Q06831 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox4Q06831 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.5■□□□□ 0.71
Sox4Q06831 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sox4Q06831 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Sox4Q06831 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox4Q06831 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.49■□□□□ 0.71
Sox4Q06831 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.49■□□□□ 0.71
Sox4Q06831 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Sox4Q06831 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
Sox4Q06831 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Sox4Q06831 Serp2-204ENSMUST00000228055 705 ntBASIC19.49■□□□□ 0.71
Sox4Q06831 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox4Q06831 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.49■□□□□ 0.71
Sox4Q06831 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox4Q06831 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sox4Q06831 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox4Q06831 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
Sox4Q06831 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox4Q06831 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox4Q06831 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox4Q06831 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
Sox4Q06831 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox4Q06831 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.48■□□□□ 0.71
Sox4Q06831 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
Sox4Q06831 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox4Q06831 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.48■□□□□ 0.71
Sox4Q06831 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox4Q06831 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox4Q06831 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.47■□□□□ 0.71
Sox4Q06831 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Sox4Q06831 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.47■□□□□ 0.71
Sox4Q06831 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.47■□□□□ 0.71
Sox4Q06831 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Sox4Q06831 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox4Q06831 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sox4Q06831 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox4Q06831 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox4Q06831 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox4Q06831 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox4Q06831 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox4Q06831 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sox4Q06831 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.46■□□□□ 0.71
Sox4Q06831 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.46■□□□□ 0.71
Sox4Q06831 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
Sox4Q06831 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox4Q06831 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox4Q06831 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox4Q06831 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox4Q06831 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox4Q06831 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox4Q06831 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.45■□□□□ 0.7
Sox4Q06831 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sox4Q06831 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.45■□□□□ 0.7
Sox4Q06831 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.45■□□□□ 0.7
Sox4Q06831 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sox4Q06831 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.45■□□□□ 0.7
Sox4Q06831 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.45■□□□□ 0.7
Sox4Q06831 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Sox4Q06831 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox4Q06831 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox4Q06831 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox4Q06831 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox4Q06831 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Sox4Q06831 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Sox4Q06831 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox4Q06831 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sox4Q06831 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox4Q06831 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox4Q06831 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox4Q06831 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox4Q06831 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox4Q06831 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox4Q06831 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sox4Q06831 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox4Q06831 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox4Q06831 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.43■□□□□ 0.7
Sox4Q06831 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sox4Q06831 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Sox4Q06831 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox4Q06831 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox4Q06831 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.43■□□□□ 0.7
Sox4Q06831 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sox4Q06831 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox4Q06831 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.43■□□□□ 0.7
Sox4Q06831 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sox4Q06831 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox4Q06831 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox4Q06831 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms