Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Brca2P97929 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brca2P97929 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Brca2P97929 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brca2P97929 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.46■□□□□ 0.71
Brca2P97929 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.46■□□□□ 0.71
Brca2P97929 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.46■□□□□ 0.71
Brca2P97929 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brca2P97929 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Brca2P97929 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.46■□□□□ 0.71
Brca2P97929 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Brca2P97929 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Brca2P97929 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.45■□□□□ 0.7
Brca2P97929 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.45■□□□□ 0.7
Brca2P97929 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.45■□□□□ 0.7
Brca2P97929 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Brca2P97929 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Brca2P97929 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Brca2P97929 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Brca2P97929 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Brca2P97929 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Brca2P97929 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Brca2P97929 Gm9988-201ENSMUST00000069786 435 ntBASIC19.44■□□□□ 0.7
Brca2P97929 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Brca2P97929 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Brca2P97929 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Brca2P97929 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Brca2P97929 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Brca2P97929 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.43■□□□□ 0.7
Brca2P97929 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brca2P97929 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Brca2P97929 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.43■□□□□ 0.7
Brca2P97929 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Brca2P97929 Gm10812-201ENSMUST00000099864 546 ntBASIC19.43■□□□□ 0.7
Brca2P97929 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Brca2P97929 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brca2P97929 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brca2P97929 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Brca2P97929 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Brca2P97929 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Brca2P97929 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Brca2P97929 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brca2P97929 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brca2P97929 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.41■□□□□ 0.7
Brca2P97929 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Brca2P97929 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Brca2P97929 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brca2P97929 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brca2P97929 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Brca2P97929 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brca2P97929 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brca2P97929 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brca2P97929 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Brca2P97929 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.4■□□□□ 0.7
Brca2P97929 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brca2P97929 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brca2P97929 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brca2P97929 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Brca2P97929 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.4■□□□□ 0.7
Brca2P97929 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.4■□□□□ 0.7
Brca2P97929 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Brca2P97929 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brca2P97929 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Brca2P97929 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brca2P97929 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Brca2P97929 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brca2P97929 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Brca2P97929 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brca2P97929 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Brca2P97929 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Brca2P97929 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brca2P97929 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brca2P97929 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.38■□□□□ 0.69
Brca2P97929 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brca2P97929 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brca2P97929 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Brca2P97929 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brca2P97929 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Brca2P97929 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brca2P97929 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Brca2P97929 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.37■□□□□ 0.69
Brca2P97929 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Brca2P97929 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Brca2P97929 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.37■□□□□ 0.69
Brca2P97929 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Brca2P97929 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.36■□□□□ 0.69
Brca2P97929 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brca2P97929 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Brca2P97929 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brca2P97929 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Brca2P97929 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Brca2P97929 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brca2P97929 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brca2P97929 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brca2P97929 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Brca2P97929 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.36■□□□□ 0.69
Brca2P97929 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brca2P97929 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brca2P97929 Gm10819-201ENSMUST00000099988 561 ntBASIC19.35■□□□□ 0.69
Brca2P97929 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms