Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SgcaP82350 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcaP82350 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcaP82350 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SgcaP82350 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SgcaP82350 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
SgcaP82350 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SgcaP82350 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcaP82350 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcaP82350 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcaP82350 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SgcaP82350 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcaP82350 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SgcaP82350 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SgcaP82350 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SgcaP82350 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SgcaP82350 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
SgcaP82350 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SgcaP82350 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SgcaP82350 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SgcaP82350 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SgcaP82350 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SgcaP82350 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.52■□□□□ 0.24
SgcaP82350 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.52■□□□□ 0.24
SgcaP82350 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
SgcaP82350 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SgcaP82350 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
SgcaP82350 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SgcaP82350 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcaP82350 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcaP82350 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcaP82350 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcaP82350 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SgcaP82350 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SgcaP82350 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.51■□□□□ 0.23
SgcaP82350 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcaP82350 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcaP82350 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcaP82350 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SgcaP82350 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SgcaP82350 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
SgcaP82350 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcaP82350 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcaP82350 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcaP82350 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SgcaP82350 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcaP82350 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcaP82350 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcaP82350 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SgcaP82350 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcaP82350 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcaP82350 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcaP82350 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SgcaP82350 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SgcaP82350 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SgcaP82350 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.49■□□□□ 0.23
SgcaP82350 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SgcaP82350 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcaP82350 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcaP82350 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcaP82350 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SgcaP82350 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SgcaP82350 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcaP82350 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcaP82350 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SgcaP82350 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcaP82350 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.48■□□□□ 0.23
SgcaP82350 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
SgcaP82350 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SgcaP82350 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcaP82350 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcaP82350 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcaP82350 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SgcaP82350 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcaP82350 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.48■□□□□ 0.23
SgcaP82350 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SgcaP82350 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcaP82350 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcaP82350 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.47■□□□□ 0.23
SgcaP82350 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcaP82350 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SgcaP82350 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcaP82350 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcaP82350 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SgcaP82350 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SgcaP82350 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcaP82350 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SgcaP82350 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SgcaP82350 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcaP82350 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcaP82350 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcaP82350 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcaP82350 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcaP82350 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcaP82350 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcaP82350 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.46■□□□□ 0.23
SgcaP82350 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcaP82350 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SgcaP82350 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SgcaP82350 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms