Protein–RNA interactions for Protein: P29268

Ctgf, Connective tissue growth factor, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtgfP29268 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CtgfP29268 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CtgfP29268 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CtgfP29268 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
CtgfP29268 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CtgfP29268 Smad6-203ENSMUST00000179458 273 ntBASIC18.51■□□□□ 0.55
CtgfP29268 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.51■□□□□ 0.55
CtgfP29268 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.51■□□□□ 0.55
CtgfP29268 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.51■□□□□ 0.55
CtgfP29268 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CtgfP29268 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CtgfP29268 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CtgfP29268 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CtgfP29268 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CtgfP29268 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CtgfP29268 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CtgfP29268 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CtgfP29268 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.5■□□□□ 0.55
CtgfP29268 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.5■□□□□ 0.55
CtgfP29268 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.5■□□□□ 0.55
CtgfP29268 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CtgfP29268 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CtgfP29268 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CtgfP29268 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.5■□□□□ 0.55
CtgfP29268 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CtgfP29268 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.5■□□□□ 0.55
CtgfP29268 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.5■□□□□ 0.55
CtgfP29268 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CtgfP29268 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.5■□□□□ 0.55
CtgfP29268 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CtgfP29268 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CtgfP29268 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CtgfP29268 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CtgfP29268 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CtgfP29268 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CtgfP29268 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.49■□□□□ 0.55
CtgfP29268 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CtgfP29268 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CtgfP29268 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.48■□□□□ 0.55
CtgfP29268 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CtgfP29268 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CtgfP29268 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CtgfP29268 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.48■□□□□ 0.55
CtgfP29268 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CtgfP29268 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CtgfP29268 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CtgfP29268 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CtgfP29268 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CtgfP29268 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CtgfP29268 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CtgfP29268 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CtgfP29268 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CtgfP29268 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CtgfP29268 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CtgfP29268 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CtgfP29268 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.47■□□□□ 0.55
CtgfP29268 Gm26833-201ENSMUST00000180899 440 ntBASIC18.47■□□□□ 0.55
CtgfP29268 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CtgfP29268 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CtgfP29268 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
CtgfP29268 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CtgfP29268 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.47■□□□□ 0.55
CtgfP29268 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.47■□□□□ 0.55
CtgfP29268 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CtgfP29268 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CtgfP29268 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CtgfP29268 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CtgfP29268 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CtgfP29268 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CtgfP29268 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
CtgfP29268 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CtgfP29268 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CtgfP29268 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CtgfP29268 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CtgfP29268 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.46■□□□□ 0.55
CtgfP29268 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CtgfP29268 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CtgfP29268 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CtgfP29268 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CtgfP29268 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CtgfP29268 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CtgfP29268 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CtgfP29268 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CtgfP29268 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.45■□□□□ 0.54
CtgfP29268 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CtgfP29268 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CtgfP29268 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CtgfP29268 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CtgfP29268 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CtgfP29268 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CtgfP29268 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CtgfP29268 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CtgfP29268 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CtgfP29268 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CtgfP29268 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.44■□□□□ 0.54
CtgfP29268 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CtgfP29268 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CtgfP29268 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CtgfP29268 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CtgfP29268 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms