Protein–RNA interactions for Protein: P20782

Chrne, Acetylcholine receptor subunit epsilon, mousemouse

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChrneP20782 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ChrneP20782 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ChrneP20782 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ChrneP20782 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ChrneP20782 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ChrneP20782 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
ChrneP20782 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ChrneP20782 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.69■□□□□ 0.58
ChrneP20782 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.69■□□□□ 0.58
ChrneP20782 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ChrneP20782 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ChrneP20782 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ChrneP20782 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ChrneP20782 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ChrneP20782 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ChrneP20782 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ChrneP20782 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.68■□□□□ 0.58
ChrneP20782 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ChrneP20782 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.68■□□□□ 0.58
ChrneP20782 Gm43137-201ENSMUST00000198052 594 ntBASIC18.68■□□□□ 0.58
ChrneP20782 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ChrneP20782 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ChrneP20782 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ChrneP20782 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ChrneP20782 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ChrneP20782 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ChrneP20782 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ChrneP20782 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ChrneP20782 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ChrneP20782 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ChrneP20782 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ChrneP20782 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ChrneP20782 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ChrneP20782 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ChrneP20782 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.67■□□□□ 0.58
ChrneP20782 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ChrneP20782 Gm45417-201ENSMUST00000209533 758 ntBASIC18.67■□□□□ 0.58
ChrneP20782 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ChrneP20782 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ChrneP20782 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ChrneP20782 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ChrneP20782 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ChrneP20782 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ChrneP20782 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ChrneP20782 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
ChrneP20782 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ChrneP20782 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ChrneP20782 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.66■□□□□ 0.58
ChrneP20782 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ChrneP20782 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ChrneP20782 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ChrneP20782 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.66■□□□□ 0.58
ChrneP20782 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ChrneP20782 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ChrneP20782 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ChrneP20782 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ChrneP20782 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ChrneP20782 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ChrneP20782 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
ChrneP20782 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.65■□□□□ 0.58
ChrneP20782 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ChrneP20782 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
ChrneP20782 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ChrneP20782 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ChrneP20782 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ChrneP20782 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ChrneP20782 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ChrneP20782 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ChrneP20782 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ChrneP20782 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ChrneP20782 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ChrneP20782 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.64■□□□□ 0.57
ChrneP20782 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.64■□□□□ 0.57
ChrneP20782 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ChrneP20782 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ChrneP20782 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ChrneP20782 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ChrneP20782 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ChrneP20782 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.63■□□□□ 0.57
ChrneP20782 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.63■□□□□ 0.57
ChrneP20782 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ChrneP20782 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ChrneP20782 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ChrneP20782 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ChrneP20782 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ChrneP20782 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChrneP20782 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChrneP20782 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChrneP20782 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ChrneP20782 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.62■□□□□ 0.57
ChrneP20782 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ChrneP20782 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ChrneP20782 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChrneP20782 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.61■□□□□ 0.57
ChrneP20782 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChrneP20782 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
ChrneP20782 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.61■□□□□ 0.57
ChrneP20782 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ChrneP20782 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.61■□□□□ 0.57
ChrneP20782 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms