Protein–RNA interactions for Protein: P0CB42

Alkbh1, Nucleic acid dioxygenase ALKBH1, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alkbh1P0CB42 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Alkbh1P0CB42 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Alkbh1P0CB42 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Alkbh1P0CB42 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Alkbh1P0CB42 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Alkbh1P0CB42 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.24■□□□□ 0.99
Alkbh1P0CB42 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Alkbh1P0CB42 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Alkbh1P0CB42 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Alkbh1P0CB42 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Alkbh1P0CB42 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Alkbh1P0CB42 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Alkbh1P0CB42 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Alkbh1P0CB42 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Alkbh1P0CB42 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Alkbh1P0CB42 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Alkbh1P0CB42 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Alkbh1P0CB42 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Alkbh1P0CB42 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Alkbh1P0CB42 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.22■□□□□ 0.99
Alkbh1P0CB42 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Alkbh1P0CB42 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Alkbh1P0CB42 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
Alkbh1P0CB42 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.22■□□□□ 0.99
Alkbh1P0CB42 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Alkbh1P0CB42 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Alkbh1P0CB42 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.22■□□□□ 0.99
Alkbh1P0CB42 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Alkbh1P0CB42 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alkbh1P0CB42 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alkbh1P0CB42 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alkbh1P0CB42 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alkbh1P0CB42 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.21■□□□□ 0.99
Alkbh1P0CB42 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alkbh1P0CB42 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Alkbh1P0CB42 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Alkbh1P0CB42 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Alkbh1P0CB42 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alkbh1P0CB42 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alkbh1P0CB42 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Alkbh1P0CB42 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.2■□□□□ 0.99
Alkbh1P0CB42 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alkbh1P0CB42 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alkbh1P0CB42 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alkbh1P0CB42 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alkbh1P0CB42 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alkbh1P0CB42 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alkbh1P0CB42 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Alkbh1P0CB42 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Alkbh1P0CB42 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Alkbh1P0CB42 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Alkbh1P0CB42 Gm43137-201ENSMUST00000198052 594 ntBASIC21.19■□□□□ 0.98
Alkbh1P0CB42 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Alkbh1P0CB42 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Alkbh1P0CB42 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Alkbh1P0CB42 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Alkbh1P0CB42 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Alkbh1P0CB42 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Alkbh1P0CB42 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Alkbh1P0CB42 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Alkbh1P0CB42 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Alkbh1P0CB42 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.18■□□□□ 0.98
Alkbh1P0CB42 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Alkbh1P0CB42 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Alkbh1P0CB42 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Alkbh1P0CB42 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Alkbh1P0CB42 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Alkbh1P0CB42 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Alkbh1P0CB42 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.18■□□□□ 0.98
Alkbh1P0CB42 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.17■□□□□ 0.98
Alkbh1P0CB42 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Alkbh1P0CB42 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Alkbh1P0CB42 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Alkbh1P0CB42 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.17■□□□□ 0.98
Alkbh1P0CB42 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.17■□□□□ 0.98
Alkbh1P0CB42 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Alkbh1P0CB42 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Alkbh1P0CB42 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Alkbh1P0CB42 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.17■□□□□ 0.98
Alkbh1P0CB42 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Alkbh1P0CB42 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alkbh1P0CB42 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Alkbh1P0CB42 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Alkbh1P0CB42 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alkbh1P0CB42 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Alkbh1P0CB42 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Alkbh1P0CB42 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Alkbh1P0CB42 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Alkbh1P0CB42 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.16■□□□□ 0.98
Alkbh1P0CB42 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Alkbh1P0CB42 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Alkbh1P0CB42 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Alkbh1P0CB42 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Alkbh1P0CB42 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Alkbh1P0CB42 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Alkbh1P0CB42 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Alkbh1P0CB42 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Alkbh1P0CB42 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.15■□□□□ 0.98
Alkbh1P0CB42 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Alkbh1P0CB42 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms