Protein–RNA interactions for Protein: P08046

Egr1, Early growth response protein 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Egr1P08046 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Egr1P08046 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Egr1P08046 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Egr1P08046 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Egr1P08046 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Egr1P08046 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Egr1P08046 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Egr1P08046 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Egr1P08046 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Egr1P08046 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Egr1P08046 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Egr1P08046 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Egr1P08046 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.57■□□□□ 0.56
Egr1P08046 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Egr1P08046 Gm715-201ENSMUST00000117865 831 ntBASIC18.57■□□□□ 0.56
Egr1P08046 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Egr1P08046 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.57■□□□□ 0.56
Egr1P08046 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Egr1P08046 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Egr1P08046 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Egr1P08046 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Egr1P08046 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Egr1P08046 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Egr1P08046 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Egr1P08046 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Egr1P08046 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Egr1P08046 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Egr1P08046 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.55■□□□□ 0.56
Egr1P08046 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.55■□□□□ 0.56
Egr1P08046 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.55■□□□□ 0.56
Egr1P08046 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Egr1P08046 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Egr1P08046 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Egr1P08046 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Egr1P08046 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Egr1P08046 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Egr1P08046 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.54■□□□□ 0.56
Egr1P08046 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.54■□□□□ 0.56
Egr1P08046 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Egr1P08046 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Egr1P08046 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Egr1P08046 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Egr1P08046 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.53■□□□□ 0.56
Egr1P08046 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Egr1P08046 Gm13146-201ENSMUST00000118508 780 ntBASIC18.53■□□□□ 0.56
Egr1P08046 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Egr1P08046 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Egr1P08046 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Egr1P08046 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Egr1P08046 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Egr1P08046 Gm10819-201ENSMUST00000099988 561 ntBASIC18.53■□□□□ 0.56
Egr1P08046 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Egr1P08046 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Egr1P08046 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Egr1P08046 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Egr1P08046 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Egr1P08046 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Egr1P08046 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.52■□□□□ 0.56
Egr1P08046 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Egr1P08046 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.52■□□□□ 0.56
Egr1P08046 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.52■□□□□ 0.56
Egr1P08046 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.52■□□□□ 0.56
Egr1P08046 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Egr1P08046 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Egr1P08046 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Egr1P08046 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Egr1P08046 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Egr1P08046 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Egr1P08046 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Egr1P08046 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.51■□□□□ 0.55
Egr1P08046 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Egr1P08046 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Egr1P08046 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.51■□□□□ 0.55
Egr1P08046 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Egr1P08046 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Egr1P08046 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Egr1P08046 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Egr1P08046 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Egr1P08046 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Egr1P08046 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Egr1P08046 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Egr1P08046 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Egr1P08046 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Egr1P08046 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Egr1P08046 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Egr1P08046 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.5■□□□□ 0.55
Egr1P08046 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Egr1P08046 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.5■□□□□ 0.55
Egr1P08046 Gm38205-201ENSMUST00000192243 258 ntBASIC18.5■□□□□ 0.55
Egr1P08046 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Egr1P08046 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Egr1P08046 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Egr1P08046 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Egr1P08046 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Egr1P08046 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.49■□□□□ 0.55
Egr1P08046 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Egr1P08046 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.49■□□□□ 0.55
Egr1P08046 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Egr1P08046 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Egr1P08046 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms