Protein–RNA interactions for Protein: O88809

Dcx, Neuronal migration protein doublecortin, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DcxO88809 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
DcxO88809 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
DcxO88809 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.63■■□□□ 1.05
DcxO88809 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DcxO88809 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
DcxO88809 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
DcxO88809 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.63■■□□□ 1.05
DcxO88809 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DcxO88809 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DcxO88809 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DcxO88809 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DcxO88809 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.62■■□□□ 1.05
DcxO88809 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DcxO88809 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.62■■□□□ 1.05
DcxO88809 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.62■■□□□ 1.05
DcxO88809 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
DcxO88809 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DcxO88809 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.62■■□□□ 1.05
DcxO88809 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
DcxO88809 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DcxO88809 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DcxO88809 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.61■■□□□ 1.05
DcxO88809 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DcxO88809 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DcxO88809 Gm13836-201ENSMUST00000121159 501 ntBASIC21.61■■□□□ 1.05
DcxO88809 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.61■■□□□ 1.05
DcxO88809 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DcxO88809 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.61■■□□□ 1.05
DcxO88809 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.61■■□□□ 1.05
DcxO88809 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DcxO88809 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DcxO88809 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DcxO88809 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
DcxO88809 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DcxO88809 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DcxO88809 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.6■■□□□ 1.05
DcxO88809 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
DcxO88809 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.6■■□□□ 1.05
DcxO88809 Gm5408-201ENSMUST00000197998 747 ntBASIC21.6■■□□□ 1.05
DcxO88809 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
DcxO88809 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.6■■□□□ 1.05
DcxO88809 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
DcxO88809 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DcxO88809 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DcxO88809 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DcxO88809 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
DcxO88809 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
DcxO88809 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.58■■□□□ 1.05
DcxO88809 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
DcxO88809 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DcxO88809 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DcxO88809 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DcxO88809 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
DcxO88809 Gm20049-201ENSMUST00000219950 730 ntBASIC21.57■■□□□ 1.04
DcxO88809 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DcxO88809 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DcxO88809 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DcxO88809 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
DcxO88809 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DcxO88809 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.56■■□□□ 1.04
DcxO88809 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.56■■□□□ 1.04
DcxO88809 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DcxO88809 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DcxO88809 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
DcxO88809 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
DcxO88809 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.55■■□□□ 1.04
DcxO88809 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DcxO88809 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DcxO88809 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.55■■□□□ 1.04
DcxO88809 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
DcxO88809 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
DcxO88809 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
DcxO88809 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
DcxO88809 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
DcxO88809 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DcxO88809 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DcxO88809 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DcxO88809 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DcxO88809 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DcxO88809 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.54■■□□□ 1.04
DcxO88809 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DcxO88809 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DcxO88809 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DcxO88809 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DcxO88809 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.54■■□□□ 1.04
DcxO88809 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DcxO88809 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DcxO88809 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DcxO88809 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.53■■□□□ 1.04
DcxO88809 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DcxO88809 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
DcxO88809 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
DcxO88809 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DcxO88809 Gm13148-201ENSMUST00000118892 745 ntBASIC21.53■■□□□ 1.04
DcxO88809 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
DcxO88809 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
DcxO88809 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.53■■□□□ 1.04
DcxO88809 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DcxO88809 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DcxO88809 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms