Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DffaO54786 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DffaO54786 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
DffaO54786 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.75■□□□□ 0.91
DffaO54786 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
DffaO54786 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
DffaO54786 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DffaO54786 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
DffaO54786 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
DffaO54786 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
DffaO54786 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DffaO54786 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DffaO54786 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DffaO54786 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
DffaO54786 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DffaO54786 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DffaO54786 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DffaO54786 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DffaO54786 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DffaO54786 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DffaO54786 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
DffaO54786 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
DffaO54786 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DffaO54786 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.73■□□□□ 0.91
DffaO54786 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DffaO54786 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DffaO54786 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DffaO54786 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.73■□□□□ 0.91
DffaO54786 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
DffaO54786 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.73■□□□□ 0.91
DffaO54786 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
DffaO54786 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DffaO54786 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DffaO54786 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DffaO54786 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DffaO54786 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DffaO54786 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
DffaO54786 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DffaO54786 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DffaO54786 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
DffaO54786 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DffaO54786 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DffaO54786 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
DffaO54786 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DffaO54786 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DffaO54786 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
DffaO54786 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.7■□□□□ 0.9
DffaO54786 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DffaO54786 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DffaO54786 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.7■□□□□ 0.9
DffaO54786 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DffaO54786 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DffaO54786 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.69■□□□□ 0.9
DffaO54786 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.69■□□□□ 0.9
DffaO54786 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DffaO54786 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DffaO54786 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.69■□□□□ 0.9
DffaO54786 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DffaO54786 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
DffaO54786 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DffaO54786 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DffaO54786 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
DffaO54786 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DffaO54786 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DffaO54786 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.68■□□□□ 0.9
DffaO54786 Golgb1-201ENSMUST00000023534 498 ntBASIC20.68■□□□□ 0.9
DffaO54786 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DffaO54786 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DffaO54786 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DffaO54786 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DffaO54786 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DffaO54786 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
DffaO54786 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DffaO54786 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
DffaO54786 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DffaO54786 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DffaO54786 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.67■□□□□ 0.9
DffaO54786 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
DffaO54786 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DffaO54786 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
DffaO54786 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
DffaO54786 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DffaO54786 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
DffaO54786 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
DffaO54786 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DffaO54786 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DffaO54786 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DffaO54786 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DffaO54786 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DffaO54786 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
DffaO54786 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
DffaO54786 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DffaO54786 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.65■□□□□ 0.9
DffaO54786 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
DffaO54786 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DffaO54786 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DffaO54786 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DffaO54786 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
DffaO54786 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DffaO54786 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms