Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn20G5E8X0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cldn20G5E8X0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn20G5E8X0 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.19■□□□□ 0.34
Cldn20G5E8X0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn20G5E8X0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cldn20G5E8X0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cldn20G5E8X0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cldn20G5E8X0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn20G5E8X0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn20G5E8X0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn20G5E8X0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn20G5E8X0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn20G5E8X0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn20G5E8X0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Cldn20G5E8X0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.18■□□□□ 0.34
Cldn20G5E8X0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Cldn20G5E8X0 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn20G5E8X0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn20G5E8X0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Cldn20G5E8X0 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn20G5E8X0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Cldn20G5E8X0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn20G5E8X0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn20G5E8X0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.17■□□□□ 0.34
Cldn20G5E8X0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cldn20G5E8X0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn20G5E8X0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn20G5E8X0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn20G5E8X0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cldn20G5E8X0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.17■□□□□ 0.34
Cldn20G5E8X0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn20G5E8X0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Cldn20G5E8X0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn20G5E8X0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn20G5E8X0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn20G5E8X0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cldn20G5E8X0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn20G5E8X0 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.16■□□□□ 0.34
Cldn20G5E8X0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Cldn20G5E8X0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn20G5E8X0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cldn20G5E8X0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cldn20G5E8X0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn20G5E8X0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn20G5E8X0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cldn20G5E8X0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn20G5E8X0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Cldn20G5E8X0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn20G5E8X0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn20G5E8X0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn20G5E8X0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cldn20G5E8X0 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.15■□□□□ 0.34
Cldn20G5E8X0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.15■□□□□ 0.34
Cldn20G5E8X0 Gm10232-201ENSMUST00000089221 720 ntBASIC17.15■□□□□ 0.34
Cldn20G5E8X0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn20G5E8X0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn20G5E8X0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cldn20G5E8X0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cldn20G5E8X0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn20G5E8X0 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn20G5E8X0 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn20G5E8X0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Cldn20G5E8X0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn20G5E8X0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn20G5E8X0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn20G5E8X0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 Gm15820-201ENSMUST00000201566 728 ntBASIC17.13■□□□□ 0.33
Cldn20G5E8X0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn20G5E8X0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn20G5E8X0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn20G5E8X0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn20G5E8X0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Cldn20G5E8X0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn20G5E8X0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Cldn20G5E8X0 Gm15546-201ENSMUST00000122095 826 ntBASIC17.12■□□□□ 0.33
Cldn20G5E8X0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn20G5E8X0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn20G5E8X0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn20G5E8X0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn20G5E8X0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.12■□□□□ 0.33
Cldn20G5E8X0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn20G5E8X0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms