Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc188F6WEU2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.44■□□□□ 0.86
Ccdc188F6WEU2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc188F6WEU2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.43■□□□□ 0.86
Ccdc188F6WEU2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.43■□□□□ 0.86
Ccdc188F6WEU2 Gm37055-201ENSMUST00000191866 133 ntBASIC20.43■□□□□ 0.86
Ccdc188F6WEU2 Gm26524-201ENSMUST00000192339 390 ntBASIC20.43■□□□□ 0.86
Ccdc188F6WEU2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc188F6WEU2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc188F6WEU2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc188F6WEU2 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.43■□□□□ 0.86
Ccdc188F6WEU2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ccdc188F6WEU2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc188F6WEU2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.43■□□□□ 0.86
Ccdc188F6WEU2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc188F6WEU2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc188F6WEU2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc188F6WEU2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc188F6WEU2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ccdc188F6WEU2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.42■□□□□ 0.86
Ccdc188F6WEU2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc188F6WEU2 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.42■□□□□ 0.86
Ccdc188F6WEU2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc188F6WEU2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc188F6WEU2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc188F6WEU2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Ccdc188F6WEU2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.41■□□□□ 0.86
Ccdc188F6WEU2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.41■□□□□ 0.86
Ccdc188F6WEU2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.41■□□□□ 0.86
Ccdc188F6WEU2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc188F6WEU2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc188F6WEU2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc188F6WEU2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc188F6WEU2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc188F6WEU2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ccdc188F6WEU2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc188F6WEU2 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc188F6WEU2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc188F6WEU2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.4■□□□□ 0.86
Ccdc188F6WEU2 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.4■□□□□ 0.86
Ccdc188F6WEU2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc188F6WEU2 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc188F6WEU2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.4■□□□□ 0.86
Ccdc188F6WEU2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Ccdc188F6WEU2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Ccdc188F6WEU2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Ccdc188F6WEU2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc188F6WEU2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ccdc188F6WEU2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc188F6WEU2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc188F6WEU2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Ccdc188F6WEU2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.39■□□□□ 0.85
Ccdc188F6WEU2 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.39■□□□□ 0.85
Ccdc188F6WEU2 Gm12896-201ENSMUST00000118430 226 ntBASIC20.39■□□□□ 0.85
Ccdc188F6WEU2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc188F6WEU2 Gm27741-201ENSMUST00000185060 237 ntBASIC20.39■□□□□ 0.85
Ccdc188F6WEU2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.39■□□□□ 0.85
Ccdc188F6WEU2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc188F6WEU2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Ccdc188F6WEU2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.38■□□□□ 0.85
Ccdc188F6WEU2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc188F6WEU2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc188F6WEU2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc188F6WEU2 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.38■□□□□ 0.85
Ccdc188F6WEU2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc188F6WEU2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc188F6WEU2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc188F6WEU2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Ccdc188F6WEU2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ccdc188F6WEU2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.37■□□□□ 0.85
Ccdc188F6WEU2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc188F6WEU2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc188F6WEU2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc188F6WEU2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.36■□□□□ 0.85
Ccdc188F6WEU2 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.36■□□□□ 0.85
Ccdc188F6WEU2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc188F6WEU2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Ccdc188F6WEU2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc188F6WEU2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.36■□□□□ 0.85
Ccdc188F6WEU2 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.36■□□□□ 0.85
Ccdc188F6WEU2 Rab3c-203ENSMUST00000224180 967 ntBASIC20.36■□□□□ 0.85
Ccdc188F6WEU2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc188F6WEU2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.35■□□□□ 0.85
Ccdc188F6WEU2 Gm38205-201ENSMUST00000192243 258 ntBASIC20.35■□□□□ 0.85
Ccdc188F6WEU2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc188F6WEU2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc188F6WEU2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc188F6WEU2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc188F6WEU2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc188F6WEU2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc188F6WEU2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc188F6WEU2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc188F6WEU2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.34■□□□□ 0.85
Ccdc188F6WEU2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Ccdc188F6WEU2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc188F6WEU2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc188F6WEU2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.34■□□□□ 0.85
Ccdc188F6WEU2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc188F6WEU2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Ccdc188F6WEU2 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms