Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
Ift140E9PY46 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
Ift140E9PY46 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Ift140E9PY46 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC32.12■■■□□ 2.73
Ift140E9PY46 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC32.12■■■□□ 2.73
Ift140E9PY46 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Ift140E9PY46 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Ift140E9PY46 Gm13534-201ENSMUST00000121169 513 ntBASIC32.11■■■□□ 2.73
Ift140E9PY46 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Ift140E9PY46 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Ift140E9PY46 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Ift140E9PY46 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC32.11■■■□□ 2.73
Ift140E9PY46 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Ift140E9PY46 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Ift140E9PY46 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC32.1■■■□□ 2.73
Ift140E9PY46 Gm29994-201ENSMUST00000195495 1193 ntBASIC32.1■■■□□ 2.73
Ift140E9PY46 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Ift140E9PY46 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
Ift140E9PY46 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC32.1■■■□□ 2.73
Ift140E9PY46 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC32.1■■■□□ 2.73
Ift140E9PY46 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Ift140E9PY46 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC32.09■■■□□ 2.73
Ift140E9PY46 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Ift140E9PY46 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Ift140E9PY46 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC32.09■■■□□ 2.73
Ift140E9PY46 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Ift140E9PY46 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Ift140E9PY46 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Ift140E9PY46 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Ift140E9PY46 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Ift140E9PY46 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC32.08■■■□□ 2.73
Ift140E9PY46 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC32.08■■■□□ 2.73
Ift140E9PY46 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Ift140E9PY46 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC32.07■■■□□ 2.72
Ift140E9PY46 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Ift140E9PY46 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC32.07■■■□□ 2.72
Ift140E9PY46 Gm38205-201ENSMUST00000192243 258 ntBASIC32.07■■■□□ 2.72
Ift140E9PY46 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC32.07■■■□□ 2.72
Ift140E9PY46 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Ift140E9PY46 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC32.06■■■□□ 2.72
Ift140E9PY46 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC32.05■■■□□ 2.72
Ift140E9PY46 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Ift140E9PY46 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ift140E9PY46 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ift140E9PY46 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC32.04■■■□□ 2.72
Ift140E9PY46 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC32.04■■■□□ 2.72
Ift140E9PY46 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
Ift140E9PY46 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC32.04■■■□□ 2.72
Ift140E9PY46 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Ift140E9PY46 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Ift140E9PY46 Gm5913-201ENSMUST00000119397 1399 ntBASIC32.04■■■□□ 2.72
Ift140E9PY46 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Ift140E9PY46 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC32.03■■■□□ 2.72
Ift140E9PY46 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Ift140E9PY46 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Ift140E9PY46 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC32.02■■■□□ 2.72
Ift140E9PY46 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC32.02■■■□□ 2.72
Ift140E9PY46 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Ift140E9PY46 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC32.02■■■□□ 2.72
Ift140E9PY46 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Ift140E9PY46 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC32.01■■■□□ 2.72
Ift140E9PY46 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC32.01■■■□□ 2.71
Ift140E9PY46 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC32.01■■■□□ 2.71
Ift140E9PY46 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Ift140E9PY46 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Ift140E9PY46 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Ift140E9PY46 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC32■■■□□ 2.71
Ift140E9PY46 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Ift140E9PY46 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC32■■■□□ 2.71
Ift140E9PY46 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Ift140E9PY46 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC32■■■□□ 2.71
Ift140E9PY46 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
Ift140E9PY46 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ift140E9PY46 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ift140E9PY46 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC31.99■■■□□ 2.71
Ift140E9PY46 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC31.99■■■□□ 2.71
Ift140E9PY46 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Ift140E9PY46 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ift140E9PY46 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Ift140E9PY46 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ift140E9PY46 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC31.98■■■□□ 2.71
Ift140E9PY46 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
Ift140E9PY46 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC31.97■■■□□ 2.71
Ift140E9PY46 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Ift140E9PY46 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Ift140E9PY46 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ift140E9PY46 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ift140E9PY46 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Ift140E9PY46 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
Ift140E9PY46 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ift140E9PY46 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ift140E9PY46 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ift140E9PY46 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Ift140E9PY46 AC153962.1-201ENSMUST00000218530 1948 ntBASIC31.95■■■□□ 2.71
Ift140E9PY46 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Ift140E9PY46 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Ift140E9PY46 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Ift140E9PY46 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
Ift140E9PY46 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
Ift140E9PY46 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms