Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pcdh17E9PXF0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh17E9PXF0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdh17E9PXF0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh17E9PXF0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh17E9PXF0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh17E9PXF0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh17E9PXF0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh17E9PXF0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdh17E9PXF0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh17E9PXF0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdh17E9PXF0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh17E9PXF0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh17E9PXF0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.4■□□□□ 0.54
Pcdh17E9PXF0 Gm10493-201ENSMUST00000097270 612 ntBASIC18.4■□□□□ 0.54
Pcdh17E9PXF0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh17E9PXF0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh17E9PXF0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.39■□□□□ 0.54
Pcdh17E9PXF0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdh17E9PXF0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh17E9PXF0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh17E9PXF0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.39■□□□□ 0.53
Pcdh17E9PXF0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh17E9PXF0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.39■□□□□ 0.53
Pcdh17E9PXF0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh17E9PXF0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh17E9PXF0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.39■□□□□ 0.53
Pcdh17E9PXF0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh17E9PXF0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh17E9PXF0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.38■□□□□ 0.53
Pcdh17E9PXF0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.38■□□□□ 0.53
Pcdh17E9PXF0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh17E9PXF0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh17E9PXF0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.38■□□□□ 0.53
Pcdh17E9PXF0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.38■□□□□ 0.53
Pcdh17E9PXF0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh17E9PXF0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh17E9PXF0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh17E9PXF0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh17E9PXF0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh17E9PXF0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh17E9PXF0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdh17E9PXF0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.37■□□□□ 0.53
Pcdh17E9PXF0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Pcdh17E9PXF0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh17E9PXF0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdh17E9PXF0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh17E9PXF0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh17E9PXF0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdh17E9PXF0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdh17E9PXF0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh17E9PXF0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh17E9PXF0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh17E9PXF0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh17E9PXF0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh17E9PXF0 Mir6236-201ENSMUST00000184437 123 ntBASIC18.36■□□□□ 0.53
Pcdh17E9PXF0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
Pcdh17E9PXF0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh17E9PXF0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.36■□□□□ 0.53
Pcdh17E9PXF0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Pcdh17E9PXF0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh17E9PXF0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh17E9PXF0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pcdh17E9PXF0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh17E9PXF0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh17E9PXF0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh17E9PXF0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh17E9PXF0 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.35■□□□□ 0.53
Pcdh17E9PXF0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh17E9PXF0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh17E9PXF0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh17E9PXF0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Pcdh17E9PXF0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh17E9PXF0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh17E9PXF0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdh17E9PXF0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh17E9PXF0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdh17E9PXF0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdh17E9PXF0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Pcdh17E9PXF0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh17E9PXF0 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh17E9PXF0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdh17E9PXF0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Pcdh17E9PXF0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh17E9PXF0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh17E9PXF0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh17E9PXF0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh17E9PXF0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh17E9PXF0 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh17E9PXF0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh17E9PXF0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh17E9PXF0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh17E9PXF0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pcdh17E9PXF0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh17E9PXF0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh17E9PXF0 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.32■□□□□ 0.52
Pcdh17E9PXF0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh17E9PXF0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdh17E9PXF0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh17E9PXF0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms