Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx8D3YU81 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx8D3YU81 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx8D3YU81 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx8D3YU81 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.99■□□□□ 0.95
Rfx8D3YU81 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.99■□□□□ 0.95
Rfx8D3YU81 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx8D3YU81 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx8D3YU81 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rfx8D3YU81 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Rfx8D3YU81 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx8D3YU81 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx8D3YU81 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx8D3YU81 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx8D3YU81 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx8D3YU81 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx8D3YU81 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.98■□□□□ 0.95
Rfx8D3YU81 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx8D3YU81 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Rfx8D3YU81 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rfx8D3YU81 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx8D3YU81 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx8D3YU81 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx8D3YU81 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.97■□□□□ 0.95
Rfx8D3YU81 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx8D3YU81 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx8D3YU81 Golph3-202ENSMUST00000226517 2359 ntBASIC20.97■□□□□ 0.95
Rfx8D3YU81 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx8D3YU81 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx8D3YU81 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx8D3YU81 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rfx8D3YU81 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx8D3YU81 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx8D3YU81 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Rfx8D3YU81 Gm12821-201ENSMUST00000120022 600 ntBASIC20.96■□□□□ 0.95
Rfx8D3YU81 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.96■□□□□ 0.95
Rfx8D3YU81 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx8D3YU81 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rfx8D3YU81 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Rfx8D3YU81 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rfx8D3YU81 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rfx8D3YU81 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rfx8D3YU81 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx8D3YU81 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Rfx8D3YU81 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.95■□□□□ 0.94
Rfx8D3YU81 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx8D3YU81 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.95■□□□□ 0.94
Rfx8D3YU81 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx8D3YU81 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
Rfx8D3YU81 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Rfx8D3YU81 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rfx8D3YU81 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.95■□□□□ 0.94
Rfx8D3YU81 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx8D3YU81 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx8D3YU81 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx8D3YU81 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx8D3YU81 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx8D3YU81 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Rfx8D3YU81 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx8D3YU81 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx8D3YU81 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rfx8D3YU81 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Rfx8D3YU81 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Rfx8D3YU81 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rfx8D3YU81 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rfx8D3YU81 Iqck-206ENSMUST00000208658 2891 ntBASIC20.93■□□□□ 0.94
Rfx8D3YU81 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.93■□□□□ 0.94
Rfx8D3YU81 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Rfx8D3YU81 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rfx8D3YU81 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx8D3YU81 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx8D3YU81 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rfx8D3YU81 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx8D3YU81 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx8D3YU81 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rfx8D3YU81 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx8D3YU81 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx8D3YU81 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx8D3YU81 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx8D3YU81 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx8D3YU81 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx8D3YU81 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx8D3YU81 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.92■□□□□ 0.94
Rfx8D3YU81 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.92■□□□□ 0.94
Rfx8D3YU81 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rfx8D3YU81 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rfx8D3YU81 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Rfx8D3YU81 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx8D3YU81 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx8D3YU81 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx8D3YU81 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rfx8D3YU81 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx8D3YU81 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rfx8D3YU81 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx8D3YU81 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx8D3YU81 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx8D3YU81 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rfx8D3YU81 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Rfx8D3YU81 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
Rfx8D3YU81 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms