Protein–RNA interactions for Protein: A0N8N6

Trav12-2, T cell receptor alpha variable 12-2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-2A0N8N6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12-2A0N8N6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12-2A0N8N6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12-2A0N8N6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav12-2A0N8N6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Trav12-2A0N8N6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12-2A0N8N6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12-2A0N8N6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12-2A0N8N6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Trav12-2A0N8N6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12-2A0N8N6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav12-2A0N8N6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
Trav12-2A0N8N6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trav12-2A0N8N6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12-2A0N8N6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12-2A0N8N6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12-2A0N8N6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav12-2A0N8N6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12-2A0N8N6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.48■□□□□ 0.39
Trav12-2A0N8N6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.48■□□□□ 0.39
Trav12-2A0N8N6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav12-2A0N8N6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trav12-2A0N8N6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-2A0N8N6 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-2A0N8N6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-2A0N8N6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Trav12-2A0N8N6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-2A0N8N6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav12-2A0N8N6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-2A0N8N6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-2A0N8N6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav12-2A0N8N6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.47■□□□□ 0.39
Trav12-2A0N8N6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Trav12-2A0N8N6 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.46■□□□□ 0.39
Trav12-2A0N8N6 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12-2A0N8N6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.46■□□□□ 0.39
Trav12-2A0N8N6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12-2A0N8N6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Trav12-2A0N8N6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12-2A0N8N6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12-2A0N8N6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12-2A0N8N6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12-2A0N8N6 Gm45102-201ENSMUST00000207427 857 ntBASIC17.46■□□□□ 0.39
Trav12-2A0N8N6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12-2A0N8N6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trav12-2A0N8N6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12-2A0N8N6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12-2A0N8N6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav12-2A0N8N6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Trav12-2A0N8N6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.46■□□□□ 0.38
Trav12-2A0N8N6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Trav12-2A0N8N6 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.45■□□□□ 0.38
Trav12-2A0N8N6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12-2A0N8N6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12-2A0N8N6 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12-2A0N8N6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav12-2A0N8N6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-2A0N8N6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-2A0N8N6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-2A0N8N6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-2A0N8N6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-2A0N8N6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.44■□□□□ 0.38
Trav12-2A0N8N6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-2A0N8N6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trav12-2A0N8N6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-2A0N8N6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-2A0N8N6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav12-2A0N8N6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trav12-2A0N8N6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-2A0N8N6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-2A0N8N6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-2A0N8N6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-2A0N8N6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-2A0N8N6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-2A0N8N6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav12-2A0N8N6 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.43■□□□□ 0.38
Trav12-2A0N8N6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.43■□□□□ 0.38
Trav12-2A0N8N6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav12-2A0N8N6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-2A0N8N6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav12-2A0N8N6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav12-2A0N8N6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav12-2A0N8N6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-2A0N8N6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-2A0N8N6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-2A0N8N6 Gm14117-201ENSMUST00000122417 843 ntBASIC17.42■□□□□ 0.38
Trav12-2A0N8N6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.42■□□□□ 0.38
Trav12-2A0N8N6 Rps24-207ENSMUST00000224568 714 ntBASIC17.42■□□□□ 0.38
Trav12-2A0N8N6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
Trav12-2A0N8N6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav12-2A0N8N6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trav12-2A0N8N6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12-2A0N8N6 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.41■□□□□ 0.38
Trav12-2A0N8N6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav12-2A0N8N6 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.41■□□□□ 0.38
Trav12-2A0N8N6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Trav12-2A0N8N6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav12-2A0N8N6 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trav12-2A0N8N6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav12-2A0N8N6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms