Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv2A0A0B4J1G8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv2A0A0B4J1G8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.62■□□□□ 0.41
Trbv2A0A0B4J1G8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.62■□□□□ 0.41
Trbv2A0A0B4J1G8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv2A0A0B4J1G8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv2A0A0B4J1G8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv2A0A0B4J1G8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv2A0A0B4J1G8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trbv2A0A0B4J1G8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv2A0A0B4J1G8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv2A0A0B4J1G8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv2A0A0B4J1G8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv2A0A0B4J1G8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trbv2A0A0B4J1G8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv2A0A0B4J1G8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv2A0A0B4J1G8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv2A0A0B4J1G8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv2A0A0B4J1G8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv2A0A0B4J1G8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv2A0A0B4J1G8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv2A0A0B4J1G8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv2A0A0B4J1G8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv2A0A0B4J1G8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trbv2A0A0B4J1G8 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Trbv2A0A0B4J1G8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv2A0A0B4J1G8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv2A0A0B4J1G8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv2A0A0B4J1G8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
Trbv2A0A0B4J1G8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv2A0A0B4J1G8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.59■□□□□ 0.41
Trbv2A0A0B4J1G8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.59■□□□□ 0.41
Trbv2A0A0B4J1G8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.59■□□□□ 0.41
Trbv2A0A0B4J1G8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv2A0A0B4J1G8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Trbv2A0A0B4J1G8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv2A0A0B4J1G8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.59■□□□□ 0.41
Trbv2A0A0B4J1G8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Trbv2A0A0B4J1G8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.59■□□□□ 0.41
Trbv2A0A0B4J1G8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv2A0A0B4J1G8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv2A0A0B4J1G8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv2A0A0B4J1G8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.58■□□□□ 0.4
Trbv2A0A0B4J1G8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.58■□□□□ 0.4
Trbv2A0A0B4J1G8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv2A0A0B4J1G8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv2A0A0B4J1G8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trbv2A0A0B4J1G8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv2A0A0B4J1G8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv2A0A0B4J1G8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv2A0A0B4J1G8 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv2A0A0B4J1G8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.57■□□□□ 0.4
Trbv2A0A0B4J1G8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv2A0A0B4J1G8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.57■□□□□ 0.4
Trbv2A0A0B4J1G8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.57■□□□□ 0.4
Trbv2A0A0B4J1G8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv2A0A0B4J1G8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Trbv2A0A0B4J1G8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv2A0A0B4J1G8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv2A0A0B4J1G8 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv2A0A0B4J1G8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv2A0A0B4J1G8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv2A0A0B4J1G8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv2A0A0B4J1G8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv2A0A0B4J1G8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv2A0A0B4J1G8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv2A0A0B4J1G8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.56■□□□□ 0.4
Trbv2A0A0B4J1G8 Mir6236-201ENSMUST00000184437 123 ntBASIC17.56■□□□□ 0.4
Trbv2A0A0B4J1G8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv2A0A0B4J1G8 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv2A0A0B4J1G8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.56■□□□□ 0.4
Trbv2A0A0B4J1G8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.56■□□□□ 0.4
Trbv2A0A0B4J1G8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv2A0A0B4J1G8 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv2A0A0B4J1G8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv2A0A0B4J1G8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv2A0A0B4J1G8 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.55■□□□□ 0.4
Trbv2A0A0B4J1G8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv2A0A0B4J1G8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv2A0A0B4J1G8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv2A0A0B4J1G8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Trbv2A0A0B4J1G8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv2A0A0B4J1G8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv2A0A0B4J1G8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv2A0A0B4J1G8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Trbv2A0A0B4J1G8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv2A0A0B4J1G8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Trbv2A0A0B4J1G8 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv2A0A0B4J1G8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv2A0A0B4J1G8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv2A0A0B4J1G8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.54■□□□□ 0.4
Trbv2A0A0B4J1G8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv2A0A0B4J1G8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv2A0A0B4J1G8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv2A0A0B4J1G8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.54■□□□□ 0.4
Trbv2A0A0B4J1G8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv2A0A0B4J1G8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.53■□□□□ 0.4
Trbv2A0A0B4J1G8 Gm43566-201ENSMUST00000196851 808 ntBASIC17.53■□□□□ 0.4
Trbv2A0A0B4J1G8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.53■□□□□ 0.4
Trbv2A0A0B4J1G8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms