Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav1A0A075B5Z4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav1A0A075B5Z4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.49■□□□□ 0.55
Trav1A0A075B5Z4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav1A0A075B5Z4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.49■□□□□ 0.55
Trav1A0A075B5Z4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.49■□□□□ 0.55
Trav1A0A075B5Z4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav1A0A075B5Z4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav1A0A075B5Z4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trav1A0A075B5Z4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav1A0A075B5Z4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav1A0A075B5Z4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav1A0A075B5Z4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav1A0A075B5Z4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav1A0A075B5Z4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav1A0A075B5Z4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav1A0A075B5Z4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav1A0A075B5Z4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav1A0A075B5Z4 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.47■□□□□ 0.55
Trav1A0A075B5Z4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav1A0A075B5Z4 Gm45102-201ENSMUST00000207427 857 ntBASIC18.47■□□□□ 0.55
Trav1A0A075B5Z4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trav1A0A075B5Z4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav1A0A075B5Z4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav1A0A075B5Z4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.47■□□□□ 0.55
Trav1A0A075B5Z4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav1A0A075B5Z4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trav1A0A075B5Z4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Trav1A0A075B5Z4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav1A0A075B5Z4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav1A0A075B5Z4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.46■□□□□ 0.55
Trav1A0A075B5Z4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trav1A0A075B5Z4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav1A0A075B5Z4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav1A0A075B5Z4 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav1A0A075B5Z4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
Trav1A0A075B5Z4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav1A0A075B5Z4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav1A0A075B5Z4 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.45■□□□□ 0.54
Trav1A0A075B5Z4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav1A0A075B5Z4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav1A0A075B5Z4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav1A0A075B5Z4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav1A0A075B5Z4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav1A0A075B5Z4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav1A0A075B5Z4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trav1A0A075B5Z4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
Trav1A0A075B5Z4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Trav1A0A075B5Z4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.44■□□□□ 0.54
Trav1A0A075B5Z4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.44■□□□□ 0.54
Trav1A0A075B5Z4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trav1A0A075B5Z4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav1A0A075B5Z4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav1A0A075B5Z4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Trav1A0A075B5Z4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav1A0A075B5Z4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trav1A0A075B5Z4 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.43■□□□□ 0.54
Trav1A0A075B5Z4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.43■□□□□ 0.54
Trav1A0A075B5Z4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav1A0A075B5Z4 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav1A0A075B5Z4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav1A0A075B5Z4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav1A0A075B5Z4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.42■□□□□ 0.54
Trav1A0A075B5Z4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav1A0A075B5Z4 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.42■□□□□ 0.54
Trav1A0A075B5Z4 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.42■□□□□ 0.54
Trav1A0A075B5Z4 Gm14117-201ENSMUST00000122417 843 ntBASIC18.42■□□□□ 0.54
Trav1A0A075B5Z4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav1A0A075B5Z4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav1A0A075B5Z4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav1A0A075B5Z4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav1A0A075B5Z4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.41■□□□□ 0.54
Trav1A0A075B5Z4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav1A0A075B5Z4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Trav1A0A075B5Z4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav1A0A075B5Z4 Rps24-207ENSMUST00000224568 714 ntBASIC18.41■□□□□ 0.54
Trav1A0A075B5Z4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav1A0A075B5Z4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav1A0A075B5Z4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav1A0A075B5Z4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav1A0A075B5Z4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav1A0A075B5Z4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Trav1A0A075B5Z4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav1A0A075B5Z4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav1A0A075B5Z4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav1A0A075B5Z4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trav1A0A075B5Z4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav1A0A075B5Z4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trav1A0A075B5Z4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.4■□□□□ 0.54
Trav1A0A075B5Z4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.4■□□□□ 0.54
Trav1A0A075B5Z4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav1A0A075B5Z4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.4■□□□□ 0.54
Trav1A0A075B5Z4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trav1A0A075B5Z4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav1A0A075B5Z4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trav1A0A075B5Z4 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.39■□□□□ 0.53
Trav1A0A075B5Z4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.39■□□□□ 0.53
Trav1A0A075B5Z4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.39■□□□□ 0.53
Trav1A0A075B5Z4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.39■□□□□ 0.53
Trav1A0A075B5Z4 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms