Protein–RNA interactions for Protein: Q3U6N9

UPF0488 protein C8orf33 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U6N9 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Q3U6N9 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Q3U6N9 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Q3U6N9 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Q3U6N9 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Q3U6N9 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Q3U6N9 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Q3U6N9 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Q3U6N9 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Q3U6N9 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Q3U6N9 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Q3U6N9 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Q3U6N9 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Q3U6N9 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.92□□□□□ -0.82
Q3U6N9 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.92□□□□□ -0.82
Q3U6N9 Gm7732-201ENSMUST00000170486 1527 ntBASIC9.92□□□□□ -0.82
Q3U6N9 Gm7740-201ENSMUST00000186171 1527 ntBASIC9.92□□□□□ -0.82
Q3U6N9 Gm7736-201ENSMUST00000096981 1527 ntBASIC9.92□□□□□ -0.82
Q3U6N9 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Q3U6N9 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Q3U6N9 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.92□□□□□ -0.82
Q3U6N9 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.91□□□□□ -0.82
Q3U6N9 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Q3U6N9 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.91□□□□□ -0.82
Q3U6N9 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.91□□□□□ -0.82
Q3U6N9 Gm11497-201ENSMUST00000138295 2154 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.91□□□□□ -0.82
Q3U6N9 Gm31763-202ENSMUST00000218205 1724 ntBASIC9.91□□□□□ -0.82
Q3U6N9 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Q3U6N9 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Q3U6N9 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Q3U6N9 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Gm12470-201ENSMUST00000117239 1049 ntBASIC9.91□□□□□ -0.82
Q3U6N9 Gm13002-201ENSMUST00000119286 682 ntBASIC9.91□□□□□ -0.82
Q3U6N9 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC9.91□□□□□ -0.82
Q3U6N9 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC9.91□□□□□ -0.82
Q3U6N9 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC9.91□□□□□ -0.82
Q3U6N9 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC9.91□□□□□ -0.82
Q3U6N9 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Gm4462-201ENSMUST00000166453 492 ntBASIC9.91□□□□□ -0.82
Q3U6N9 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Gm17107-201ENSMUST00000170983 553 ntBASIC9.91□□□□□ -0.82
Q3U6N9 Pkib-204ENSMUST00000175852 731 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Gm23521-201ENSMUST00000177845 110 ntBASIC9.91□□□□□ -0.82
Q3U6N9 Gm20474-201ENSMUST00000180089 596 ntBASIC9.91□□□□□ -0.82
Q3U6N9 Gm26532-201ENSMUST00000180630 690 ntBASIC9.91□□□□□ -0.82
Q3U6N9 Gm6967-201ENSMUST00000182599 1007 ntBASIC9.91□□□□□ -0.82
Q3U6N9 Zfp572-201ENSMUST00000183674 1098 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Q3U6N9 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC9.91□□□□□ -0.82
Q3U6N9 Gm43866-201ENSMUST00000203894 839 ntBASIC9.91□□□□□ -0.82
Q3U6N9 Gm44236-201ENSMUST00000204492 513 ntBASIC9.91□□□□□ -0.82
Q3U6N9 Lysmd4-203ENSMUST00000207757 631 ntAPPRIS ALT2 TSL 3 BASIC9.91□□□□□ -0.82
Q3U6N9 AC134439.3-201ENSMUST00000223486 851 ntTSL 5 BASIC9.91□□□□□ -0.82
Q3U6N9 AC161877.1-201ENSMUST00000227736 699 ntBASIC9.91□□□□□ -0.82
Q3U6N9 Crip1-201ENSMUST00000006523 445 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Gm8991-201ENSMUST00000073014 1075 ntBASIC9.91□□□□□ -0.82
Q3U6N9 Gm37516-201ENSMUST00000192593 1954 ntBASIC9.91□□□□□ -0.82
Q3U6N9 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Q3U6N9 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC9.91□□□□□ -0.82
Q3U6N9 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Q3U6N9 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Q3U6N9 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Q3U6N9 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Q3U6N9 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Q3U6N9 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Q3U6N9 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Q3U6N9 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Q3U6N9 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Q3U6N9 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Q3U6N9 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Q3U6N9 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Q3U6N9 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Q3U6N9 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms