Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm42521-201ENSMUST00000199190 2040 ntBASIC9.33□□□□□ -0.92
Lsm3P62311 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Lsm3P62311 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Sptbn1-201ENSMUST00000006629 8461 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Lsm3P62311 Gm43910-201ENSMUST00000204561 3241 ntBASIC9.33□□□□□ -0.92
Lsm3P62311 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Lsm3P62311 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC9.33□□□□□ -0.92
Lsm3P62311 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Lsm3P62311 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Lsm3P62311 Gm37748-201ENSMUST00000194379 1140 ntBASIC9.33□□□□□ -0.92
Lsm3P62311 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 2210039B01Rik-201ENSMUST00000222490 1044 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.33□□□□□ -0.92
Lsm3P62311 Olfr1189-201ENSMUST00000090700 921 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Lsm3P62311 Gm19611-201ENSMUST00000216401 1865 ntBASIC9.33□□□□□ -0.92
Lsm3P62311 Pitrm1-201ENSMUST00000021611 3318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Ndn-201ENSMUST00000038775 3694 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Lsm3P62311 Mfsd8-201ENSMUST00000026859 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Pygm-202ENSMUST00000113483 2583 ntTSL 5 BASIC9.33□□□□□ -0.92
Lsm3P62311 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Gm42777-201ENSMUST00000196026 3603 ntBASIC9.33□□□□□ -0.92
Lsm3P62311 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Cwc22-201ENSMUST00000065889 3471 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Lsm3P62311 Specc1l-202ENSMUST00000105421 6632 ntTSL 5 BASIC9.33□□□□□ -0.92
Lsm3P62311 Gm42449-201ENSMUST00000200349 2258 ntBASIC9.33□□□□□ -0.92
Lsm3P62311 AL662807.2-201ENSMUST00000224024 3335 ntBASIC9.33□□□□□ -0.92
Lsm3P62311 Samd15-202ENSMUST00000182869 2031 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Lsm3P62311 Gm45170-201ENSMUST00000206746 1671 ntBASIC9.32□□□□□ -0.92
Lsm3P62311 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Lsm3P62311 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Lsm3P62311 AC102847.1-201ENSMUST00000228390 2498 ntBASIC9.32□□□□□ -0.92
Lsm3P62311 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Gabpa-202ENSMUST00000114184 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Smoc1-202ENSMUST00000110347 3496 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Nrxn3-203ENSMUST00000110133 2699 ntTSL 5 BASIC9.32□□□□□ -0.92
Lsm3P62311 Gm36958-201ENSMUST00000192388 1875 ntBASIC9.32□□□□□ -0.92
Lsm3P62311 Gm10531-201ENSMUST00000193527 2303 ntBASIC9.32□□□□□ -0.92
Lsm3P62311 Taf8-201ENSMUST00000067103 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Cyfip2-201ENSMUST00000093165 6604 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Dido1-206ENSMUST00000103057 4906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 1700017G19Rik-201ENSMUST00000035860 2437 ntTSL 2 BASIC9.32□□□□□ -0.92
Lsm3P62311 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Cnga3-204ENSMUST00000195272 2197 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Lsm3P62311 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Lsm3P62311 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Lsm3P62311 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC9.32□□□□□ -0.92
Lsm3P62311 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Lsm3P62311 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Lsm3P62311 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Lsm3P62311 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Lsm3P62311 Gm29155-201ENSMUST00000185910 269 ntBASIC9.32□□□□□ -0.92
Lsm3P62311 Ighv1-48-201ENSMUST00000191795 294 ntBASIC9.32□□□□□ -0.92
Lsm3P62311 Gm37976-201ENSMUST00000193827 345 ntBASIC9.32□□□□□ -0.92
Lsm3P62311 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.32□□□□□ -0.92
Lsm3P62311 Gm37981-201ENSMUST00000194280 535 ntBASIC9.32□□□□□ -0.92
Lsm3P62311 Gm30946-201ENSMUST00000198288 724 ntBASIC9.32□□□□□ -0.92
Lsm3P62311 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.32□□□□□ -0.92
Lsm3P62311 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Lsm3P62311 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Trpc7-201ENSMUST00000022023 3483 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Trim17-202ENSMUST00000075141 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Mef2a-208ENSMUST00000156690 5538 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Gm10782-202ENSMUST00000223775 1480 ntBASIC9.32□□□□□ -0.92
Lsm3P62311 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
Lsm3P62311 Gm43820-201ENSMUST00000199414 3346 ntBASIC9.32□□□□□ -0.92
Lsm3P62311 Zswim9-202ENSMUST00000119139 3986 ntAPPRIS P5 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Lsm3P62311 Arhgap27-201ENSMUST00000041385 3512 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Prokr2-202ENSMUST00000110156 3829 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Lsm3P62311 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Pcdhga5-201ENSMUST00000193414 4664 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Gm2a-201ENSMUST00000000608 4127 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 2410002F23Rik-202ENSMUST00000071296 4201 ntAPPRIS P2 TSL 2 BASIC9.32□□□□□ -0.92
Lsm3P62311 Apol11b-201ENSMUST00000166623 2057 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Lsm3P62311 Crx-201ENSMUST00000044434 2919 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Lsm3P62311 Gm7405-201ENSMUST00000121476 1337 ntBASIC9.31□□□□□ -0.92
Lsm3P62311 Nfia-203ENSMUST00000092532 9382 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Lsm3P62311 Snx25-201ENSMUST00000041582 3206 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Lsm3P62311 Nbr1-201ENSMUST00000071537 3239 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms