Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Gm38227-201ENSMUST00000193036 1602 ntBASIC11.93□□□□□ -0.5
Vcam1P29533 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Gemin8-201ENSMUST00000056410 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Nrf1-203ENSMUST00000069831 1625 ntTSL 5 BASIC11.93□□□□□ -0.5
Vcam1P29533 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Vcam1P29533 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Sf3a3-201ENSMUST00000030734 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 BC051665-201ENSMUST00000026078 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Spata17-201ENSMUST00000027908 1303 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
Vcam1P29533 Gm44664-201ENSMUST00000206841 1786 ntBASIC11.93□□□□□ -0.5
Vcam1P29533 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Vcam1P29533 Gm7781-201ENSMUST00000117258 788 ntBASIC11.93□□□□□ -0.5
Vcam1P29533 Gm26810-201ENSMUST00000181153 1106 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Gm27953-201ENSMUST00000185171 143 ntBASIC11.93□□□□□ -0.5
Vcam1P29533 Gm28806-201ENSMUST00000191134 528 ntTSL 5 BASIC11.93□□□□□ -0.5
Vcam1P29533 4930515G16Rik-201ENSMUST00000199440 1256 ntBASIC11.93□□□□□ -0.5
Vcam1P29533 Gm44204-201ENSMUST00000204722 737 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Vcam1P29533 Cks2-201ENSMUST00000075853 692 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Fam13c-203ENSMUST00000173042 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 AC154575.1-201ENSMUST00000227166 1474 ntBASIC11.93□□□□□ -0.5
Vcam1P29533 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.93□□□□□ -0.5
Vcam1P29533 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Vcam1P29533 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Gm38357-201ENSMUST00000195382 2464 ntBASIC11.93□□□□□ -0.5
Vcam1P29533 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Sfmbt2-202ENSMUST00000114861 1813 ntTSL 5 BASIC11.93□□□□□ -0.5
Vcam1P29533 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Trpc5-201ENSMUST00000040184 4158 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vcam1P29533 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vcam1P29533 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vcam1P29533 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.92□□□□□ -0.5
Vcam1P29533 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vcam1P29533 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC11.92□□□□□ -0.5
Vcam1P29533 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vcam1P29533 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vcam1P29533 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vcam1P29533 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vcam1P29533 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vcam1P29533 Hnf1aos1-202ENSMUST00000129609 516 ntTSL 2 BASIC11.92□□□□□ -0.5
Vcam1P29533 Gm13861-201ENSMUST00000137136 495 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vcam1P29533 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vcam1P29533 Mir3091-201ENSMUST00000175086 76 ntBASIC11.92□□□□□ -0.5
Vcam1P29533 Gm5561-201ENSMUST00000178932 480 ntBASIC11.92□□□□□ -0.5
Vcam1P29533 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vcam1P29533 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC11.92□□□□□ -0.5
Vcam1P29533 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC11.92□□□□□ -0.5
Vcam1P29533 Gm18124-201ENSMUST00000210695 706 ntBASIC11.92□□□□□ -0.5
Vcam1P29533 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC11.92□□□□□ -0.5
Vcam1P29533 A930033M14Rik-201ENSMUST00000217206 400 ntBASIC11.92□□□□□ -0.5
Vcam1P29533 AC134537.1-201ENSMUST00000219205 265 ntBASIC11.92□□□□□ -0.5
Vcam1P29533 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC11.92□□□□□ -0.5
Vcam1P29533 Mir341-201ENSMUST00000093593 96 ntBASIC11.92□□□□□ -0.5
Vcam1P29533 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Vcam1P29533 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vcam1P29533 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vcam1P29533 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vcam1P29533 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vcam1P29533 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vcam1P29533 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vcam1P29533 Gm8806-201ENSMUST00000120076 1407 ntBASIC11.92□□□□□ -0.5
Vcam1P29533 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vcam1P29533 Gm43737-201ENSMUST00000199915 2740 ntBASIC11.92□□□□□ -0.5
Vcam1P29533 Gm10603-201ENSMUST00000183512 2279 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vcam1P29533 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vcam1P29533 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vcam1P29533 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vcam1P29533 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vcam1P29533 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vcam1P29533 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vcam1P29533 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vcam1P29533 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vcam1P29533 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vcam1P29533 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vcam1P29533 Gm37583-201ENSMUST00000195460 2487 ntBASIC11.91□□□□□ -0.5
Vcam1P29533 Gm8809-201ENSMUST00000119367 743 ntBASIC11.91□□□□□ -0.5
Vcam1P29533 Gm12035-201ENSMUST00000121890 623 ntBASIC11.91□□□□□ -0.5
Vcam1P29533 Apela-201ENSMUST00000124790 945 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Vcam1P29533 Gm11947-201ENSMUST00000125275 273 ntTSL 3 BASIC11.91□□□□□ -0.5
Vcam1P29533 Gm28309-201ENSMUST00000136302 623 ntTSL 5 BASIC11.91□□□□□ -0.5
Vcam1P29533 Gm26021-201ENSMUST00000158664 131 ntBASIC11.91□□□□□ -0.5
Vcam1P29533 Rsl24d1-203ENSMUST00000165177 597 ntTSL 3 BASIC11.91□□□□□ -0.5
Vcam1P29533 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vcam1P29533 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC11.91□□□□□ -0.5
Vcam1P29533 Gm5130-201ENSMUST00000210233 959 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms