Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sec61a2Q9JLR1 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC9.42□□□□□ -0.9
Sec61a2Q9JLR1 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sec61a2Q9JLR1 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Sec61a2Q9JLR1 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sec61a2Q9JLR1 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Sec61a2Q9JLR1 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Sec61a2Q9JLR1 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Sipa1l1-205ENSMUST00000220963 5907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Zfp275-202ENSMUST00000114499 6284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Gm37242-201ENSMUST00000191873 2085 ntBASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Rnf38-201ENSMUST00000045793 5012 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Gm11411-201ENSMUST00000117951 719 ntBASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Gm31274-201ENSMUST00000197356 229 ntBASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Gm43249-201ENSMUST00000200464 458 ntBASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Gm5178-201ENSMUST00000219380 898 ntBASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Gm8181-201ENSMUST00000062242 669 ntBASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Gm42833-201ENSMUST00000196019 2124 ntBASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Gm10417-201ENSMUST00000194341 3522 ntBASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Stxbp5l-206ENSMUST00000114787 4394 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Gm11735-201ENSMUST00000106377 1581 ntBASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Rapgef6-203ENSMUST00000102743 8189 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Synpo2-202ENSMUST00000106426 7063 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Sec61a2Q9JLR1 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 AC153524.2-202ENSMUST00000220401 1794 ntBASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Gm43334-201ENSMUST00000197740 1318 ntBASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Gm14165-201ENSMUST00000121456 952 ntBASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Gm24809-201ENSMUST00000175318 271 ntBASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Gm20781-201ENSMUST00000193154 693 ntBASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Gm21736-201ENSMUST00000195399 693 ntBASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 CT025551.1-201ENSMUST00000223996 692 ntBASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Sardh-202ENSMUST00000102886 4521 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Ppfibp1-202ENSMUST00000111623 4782 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Sec61a2Q9JLR1 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Sec61a2Q9JLR1 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.91
Sec61a2Q9JLR1 Lrrc57-201ENSMUST00000102496 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Sec61a2Q9JLR1 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Sec61a2Q9JLR1 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC9.4□□□□□ -0.91
Sec61a2Q9JLR1 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms