Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Trim13Q9CYB0 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Gm15604-201ENSMUST00000118350 1456 ntBASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Nkiras1-202ENSMUST00000132374 4598 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 AC153498.1-201ENSMUST00000219775 2722 ntBASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Gm12663-201ENSMUST00000118481 958 ntBASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Mir1893-201ENSMUST00000122565 83 ntBASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Gm23045-201ENSMUST00000175041 96 ntBASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Gm29543-201ENSMUST00000188138 967 ntBASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Gm29288-201ENSMUST00000191582 901 ntBASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Gm37293-201ENSMUST00000191658 295 ntBASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Gm37604-201ENSMUST00000191749 1272 ntBASIC9.66□□□□□ -0.86
Trim13Q9CYB0 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 AC129975.1-201ENSMUST00000224816 592 ntBASIC9.66□□□□□ -0.86
Trim13Q9CYB0 AC159196.1-201ENSMUST00000225524 377 ntBASIC9.66□□□□□ -0.86
Trim13Q9CYB0 CT025618.1-203ENSMUST00000227008 589 ntBASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Treml2-201ENSMUST00000170941 4509 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Kalrn-212ENSMUST00000114973 5253 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Dgkd-201ENSMUST00000027517 5695 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Synpo2-202ENSMUST00000106426 7063 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Dach2-205ENSMUST00000113382 5155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim13Q9CYB0 Prkd3-204ENSMUST00000119284 4743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Gm37909-201ENSMUST00000193157 2159 ntBASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Trim69-201ENSMUST00000036089 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 March6-201ENSMUST00000090227 6260 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Gm44798-201ENSMUST00000208123 2410 ntBASIC9.65□□□□□ -0.86
Trim13Q9CYB0 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Scnn1a-206ENSMUST00000176655 3354 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Abcc5-204ENSMUST00000115547 5372 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Igf2bp1-201ENSMUST00000013559 8378 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Sh3tc1-207ENSMUST00000201511 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Klhl7-202ENSMUST00000163409 2857 ntTSL 2 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Gm14659-201ENSMUST00000117667 843 ntBASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Gm8737-201ENSMUST00000122208 642 ntBASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Gm16165-201ENSMUST00000160140 795 ntBASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Gm38018-201ENSMUST00000195651 540 ntBASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Mir7686-201ENSMUST00000200604 57 ntBASIC9.65□□□□□ -0.86
Trim13Q9CYB0 Gm42474-201ENSMUST00000201073 505 ntBASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms