Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC9.84□□□□□ -0.83
Clrn1Q8K445 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC9.84□□□□□ -0.83
Clrn1Q8K445 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
Clrn1Q8K445 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Arid5a-202ENSMUST00000115029 4329 ntTSL 3 BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Zfr-201ENSMUST00000122941 4850 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.83□□□□□ -0.84
Clrn1Q8K445 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Gm14005-210ENSMUST00000225087 1413 ntBASIC9.83□□□□□ -0.84
Clrn1Q8K445 Pcdhga5-201ENSMUST00000193414 4664 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Pogk-206ENSMUST00000169324 7034 ntAPPRIS ALT2 TSL 3 BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Zfp74-204ENSMUST00000108212 2060 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Clrn1Q8K445 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Gm9162-201ENSMUST00000182081 991 ntBASIC9.83□□□□□ -0.84
Clrn1Q8K445 Gm3671-201ENSMUST00000182463 1007 ntBASIC9.83□□□□□ -0.84
Clrn1Q8K445 Gm27440-201ENSMUST00000184785 107 ntBASIC9.83□□□□□ -0.84
Clrn1Q8K445 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC9.83□□□□□ -0.84
Clrn1Q8K445 Gm8022-201ENSMUST00000191763 904 ntBASIC9.83□□□□□ -0.84
Clrn1Q8K445 Gm37141-201ENSMUST00000191938 422 ntBASIC9.83□□□□□ -0.84
Clrn1Q8K445 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC9.83□□□□□ -0.84
Clrn1Q8K445 BC106175-202ENSMUST00000219344 1213 ntBASIC9.83□□□□□ -0.84
Clrn1Q8K445 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Frmd6-201ENSMUST00000057859 4662 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Clrn1Q8K445 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Clrn1Q8K445 AC144938.1-201ENSMUST00000223994 2167 ntBASIC9.82□□□□□ -0.84
Clrn1Q8K445 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Stxbp5l-206ENSMUST00000114787 4394 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Gm11475-201ENSMUST00000118482 476 ntBASIC9.82□□□□□ -0.84
Clrn1Q8K445 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Mir6958-201ENSMUST00000184207 73 ntBASIC9.82□□□□□ -0.84
Clrn1Q8K445 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Gm7539-201ENSMUST00000189789 630 ntBASIC9.82□□□□□ -0.84
Clrn1Q8K445 Gm43506-201ENSMUST00000200675 753 ntBASIC9.82□□□□□ -0.84
Clrn1Q8K445 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC9.82□□□□□ -0.84
Clrn1Q8K445 CT573086.4-201ENSMUST00000226729 342 ntBASIC9.82□□□□□ -0.84
Clrn1Q8K445 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Gm6478-201ENSMUST00000099450 742 ntBASIC9.82□□□□□ -0.84
Clrn1Q8K445 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Gm42974-201ENSMUST00000199556 2654 ntBASIC9.82□□□□□ -0.84
Clrn1Q8K445 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Gm43625-201ENSMUST00000199177 1539 ntBASIC9.82□□□□□ -0.84
Clrn1Q8K445 Gm13120-201ENSMUST00000117343 1446 ntBASIC9.82□□□□□ -0.84
Clrn1Q8K445 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
Clrn1Q8K445 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms