Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Gm42858-201ENSMUST00000202512 1704 ntBASIC10.5□□□□□ -0.73
Rad54bQ6PFE3 Gm42974-201ENSMUST00000199556 2654 ntBASIC10.5□□□□□ -0.73
Rad54bQ6PFE3 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rad54bQ6PFE3 Fblim1-203ENSMUST00000105785 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Gm11470-201ENSMUST00000118868 1475 ntBASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 B930082K07Rik-201ENSMUST00000181046 2478 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Adam6a-201ENSMUST00000053086 2558 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Gm12397-201ENSMUST00000117674 615 ntBASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Gm12516-201ENSMUST00000120819 385 ntBASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Gm13981-201ENSMUST00000122360 447 ntBASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Ap1g1-206ENSMUST00000179104 1096 ntBASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Gm44498-201ENSMUST00000199509 111 ntBASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Gm3786-201ENSMUST00000202659 378 ntBASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Gm6352-201ENSMUST00000203583 1134 ntBASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Gm43305-202ENSMUST00000225083 705 ntBASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 CT025553.1-201ENSMUST00000226292 299 ntBASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 AC149294.3-201ENSMUST00000226888 732 ntBASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 AC154806.7-201ENSMUST00000227998 202 ntBASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Gm10179-201ENSMUST00000086233 688 ntBASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Atf7-201ENSMUST00000096143 390 ntBASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Zadh2-201ENSMUST00000060223 3321 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Gm43081-201ENSMUST00000199082 1380 ntBASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Fignl1-207ENSMUST00000171938 2974 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Trpc5-201ENSMUST00000040184 4158 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Amer3-201ENSMUST00000052670 4392 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Rad54bQ6PFE3 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Tdp1-207ENSMUST00000153627 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Gm44740-201ENSMUST00000205603 1614 ntBASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Ddo-201ENSMUST00000019977 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Gm4454-201ENSMUST00000190585 2578 ntBASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Mir1905-201ENSMUST00000122779 82 ntBASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Gm16288-201ENSMUST00000137940 367 ntBASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Gm18776-201ENSMUST00000188833 654 ntBASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Gm19918-201ENSMUST00000194858 400 ntBASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Gm3726-201ENSMUST00000203110 785 ntBASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Nupl1-202ENSMUST00000041905 3913 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Fancb-202ENSMUST00000101082 2980 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Rad54bQ6PFE3 Sytl4-202ENSMUST00000113294 2958 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms