Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Gm10731-201ENSMUST00000181171 448 ntBASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.05□□□□□ -0.64
Trim43aQ3TL54 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.05□□□□□ -0.64
Trim43aQ3TL54 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Olfr709-ps1-201ENSMUST00000072368 924 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Dhx35-202ENSMUST00000109478 3284 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Pkp1-203ENSMUST00000163260 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Mfsd2b-204ENSMUST00000137337 2641 ntTSL 2 BASIC11.05□□□□□ -0.64
Trim43aQ3TL54 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Zc3h7a-201ENSMUST00000037633 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Mid1-202ENSMUST00000078947 3591 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Lrrc28-202ENSMUST00000053950 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Stk26-201ENSMUST00000033444 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Mir6998-201ENSMUST00000183343 64 ntBASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.04□□□□□ -0.64
Trim43aQ3TL54 AC166165.1-201ENSMUST00000214352 874 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Gm8170-201ENSMUST00000218581 945 ntBASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Gm19009-201ENSMUST00000223072 823 ntBASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Mthfd1-206ENSMUST00000220046 3040 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.04□□□□□ -0.64
Trim43aQ3TL54 Nupl1-202ENSMUST00000041905 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Zmpste24-201ENSMUST00000058754 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Gm17980-201ENSMUST00000217977 2349 ntBASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Ptpn7-202ENSMUST00000167080 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Fam13c-203ENSMUST00000173042 3310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Tbck-202ENSMUST00000169172 6578 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Kcne1-201ENSMUST00000051705 3155 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Cux1-211ENSMUST00000176745 2831 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Gm25554-201ENSMUST00000158075 113 ntBASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Gm25072-201ENSMUST00000175233 235 ntBASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Gm37976-201ENSMUST00000193827 345 ntBASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Gm44329-201ENSMUST00000197469 112 ntBASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Gm44158-201ENSMUST00000203881 505 ntBASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.03□□□□□ -0.64
Trim43aQ3TL54 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms