Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm15664-201ENSMUST00000160167 184 ntBASIC13.11□□□□□ -0.31
Smarcc1P97496 Scgb1b21-201ENSMUST00000170232 268 ntBASIC13.11□□□□□ -0.31
Smarcc1P97496 Gm4398-201ENSMUST00000182698 992 ntBASIC13.11□□□□□ -0.31
Smarcc1P97496 Htr1b-201ENSMUST00000051005 1273 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Smarcc1P97496 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Smarcc1P97496 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Smarcc1P97496 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc1P97496 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc1P97496 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc1P97496 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc1P97496 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc1P97496 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc1P97496 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc1P97496 Ccl6-201ENSMUST00000019071 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc1P97496 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc1P97496 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc1P97496 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Smarcc1P97496 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc1P97496 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc1P97496 Cct2-201ENSMUST00000047672 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Smarcc1P97496 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smarcc1P97496 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.1□□□□□ -0.31
Smarcc1P97496 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC13.1□□□□□ -0.31
Smarcc1P97496 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC13.1□□□□□ -0.31
Smarcc1P97496 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Smarcc1P97496 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Smarcc1P97496 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.1□□□□□ -0.31
Smarcc1P97496 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC13.1□□□□□ -0.31
Smarcc1P97496 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smarcc1P97496 Gm4880-201ENSMUST00000207645 1696 ntBASIC13.1□□□□□ -0.31
Smarcc1P97496 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Smarcc1P97496 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC13.1□□□□□ -0.31
Smarcc1P97496 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC13.1□□□□□ -0.31
Smarcc1P97496 Gm15720-201ENSMUST00000117133 282 ntBASIC13.1□□□□□ -0.31
Smarcc1P97496 Gm14227-201ENSMUST00000119431 629 ntBASIC13.1□□□□□ -0.31
Smarcc1P97496 Gm11800-201ENSMUST00000120050 579 ntBASIC13.1□□□□□ -0.31
Smarcc1P97496 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smarcc1P97496 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC13.1□□□□□ -0.31
Smarcc1P97496 Mir3100-201ENSMUST00000174918 65 ntBASIC13.1□□□□□ -0.31
Smarcc1P97496 Gm24180-201ENSMUST00000179961 110 ntBASIC13.1□□□□□ -0.31
Smarcc1P97496 Gm26698-201ENSMUST00000181290 971 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smarcc1P97496 Tspy-ps-203ENSMUST00000186546 989 ntBASIC13.1□□□□□ -0.31
Smarcc1P97496 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC13.1□□□□□ -0.31
Smarcc1P97496 Tdrkh-203ENSMUST00000196386 1050 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 Gm42875-201ENSMUST00000197674 1015 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC13.1□□□□□ -0.31
Smarcc1P97496 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Smarcc1P97496 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 Gm42651-201ENSMUST00000199851 1339 ntBASIC13.1□□□□□ -0.31
Smarcc1P97496 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Smarcc1P97496 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc1P97496 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc1P97496 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc1P97496 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc1P97496 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.09□□□□□ -0.31
Smarcc1P97496 Gm45496-201ENSMUST00000209918 2917 ntBASIC13.09□□□□□ -0.31
Smarcc1P97496 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc1P97496 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc1P97496 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc1P97496 Gm38246-201ENSMUST00000194318 1511 ntBASIC13.09□□□□□ -0.31
Smarcc1P97496 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC13.09□□□□□ -0.31
Smarcc1P97496 AC132833.1-202ENSMUST00000228875 1690 ntBASIC13.09□□□□□ -0.31
Smarcc1P97496 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc1P97496 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc1P97496 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Smarcc1P97496 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc1P97496 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc1P97496 Gm15661-201ENSMUST00000117390 556 ntBASIC13.09□□□□□ -0.31
Smarcc1P97496 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Smarcc1P97496 Pde7a-203ENSMUST00000121951 382 ntTSL 3 BASIC13.09□□□□□ -0.31
Smarcc1P97496 Gm12362-201ENSMUST00000121986 342 ntBASIC13.09□□□□□ -0.31
Smarcc1P97496 Wdr17-204ENSMUST00000129132 1043 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc1P97496 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC13.09□□□□□ -0.31
Smarcc1P97496 Gm23081-201ENSMUST00000157845 297 ntBASIC13.09□□□□□ -0.31
Smarcc1P97496 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc1P97496 Gm37819-201ENSMUST00000194626 1065 ntBASIC13.09□□□□□ -0.31
Smarcc1P97496 Gm44547-201ENSMUST00000207793 1446 ntBASIC13.09□□□□□ -0.31
Smarcc1P97496 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC13.09□□□□□ -0.31
Smarcc1P97496 Gm3635-201ENSMUST00000212314 354 ntBASIC13.09□□□□□ -0.31
Smarcc1P97496 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC13.09□□□□□ -0.31
Smarcc1P97496 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC13.09□□□□□ -0.31
Smarcc1P97496 Arg2-201ENSMUST00000021550 1428 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Smarcc1P97496 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms