Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Gprin2-203ENSMUST00000226613 10354 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Cd28P31041 Olfr55-202ENSMUST00000214888 4675 ntTSL 5 BASIC9.12□□□□□ -0.95
Cd28P31041 Gm21039-201ENSMUST00000223359 2012 ntBASIC9.12□□□□□ -0.95
Cd28P31041 Zfp275-202ENSMUST00000114499 6284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC9.12□□□□□ -0.95
Cd28P31041 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Cep95-202ENSMUST00000103068 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Fubp1-220ENSMUST00000200524 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Cd28P31041 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cd28P31041 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Serpinb9c-201ENSMUST00000021837 1902 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Nlrc5-204ENSMUST00000182409 4552 ntTSL 5 BASIC9.11□□□□□ -0.95
Cd28P31041 Vma21-202ENSMUST00000114576 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Ank3-206ENSMUST00000092434 5886 ntAPPRIS P4 TSL 5 BASIC9.11□□□□□ -0.95
Cd28P31041 Wdr35-201ENSMUST00000085745 4501 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Rffl-204ENSMUST00000093975 3575 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Tnip1-205ENSMUST00000108886 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Cdk20-201ENSMUST00000021939 4118 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC9.11□□□□□ -0.95
Cd28P31041 AC154575.1-201ENSMUST00000227166 1474 ntBASIC9.11□□□□□ -0.95
Cd28P31041 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Gm4784-201ENSMUST00000117365 1824 ntBASIC9.11□□□□□ -0.95
Cd28P31041 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Gm5944-201ENSMUST00000118182 1001 ntBASIC9.11□□□□□ -0.95
Cd28P31041 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC9.11□□□□□ -0.95
Cd28P31041 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC9.11□□□□□ -0.95
Cd28P31041 Gm3551-201ENSMUST00000190750 664 ntBASIC9.11□□□□□ -0.95
Cd28P31041 Gm37976-201ENSMUST00000193827 345 ntBASIC9.11□□□□□ -0.95
Cd28P31041 Gm37860-201ENSMUST00000195380 1034 ntBASIC9.11□□□□□ -0.95
Cd28P31041 Gm43163-201ENSMUST00000196571 442 ntBASIC9.11□□□□□ -0.95
Cd28P31041 Gm43811-201ENSMUST00000202862 695 ntBASIC9.11□□□□□ -0.95
Cd28P31041 AC157650.1-201ENSMUST00000224582 610 ntBASIC9.11□□□□□ -0.95
Cd28P31041 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Cd28P31041 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Celf4-202ENSMUST00000115816 3995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC9.11□□□□□ -0.95
Cd28P31041 Ncoa3-201ENSMUST00000088095 7531 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Inpp4a-207ENSMUST00000136846 3576 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
Cd28P31041 Cgnl1-201ENSMUST00000072899 6754 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
Cd28P31041 Rimbp2-201ENSMUST00000111346 4264 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.95
Cd28P31041 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Cd28P31041 Zfp60-208ENSMUST00000167955 2115 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Cd28P31041 Ddhd2-201ENSMUST00000033975 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Tacc2-208ENSMUST00000207549 3492 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Erc2-205ENSMUST00000210135 6233 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Gm35394-201ENSMUST00000196434 3252 ntTSL 5 BASIC9.11□□□□□ -0.95
Cd28P31041 Krt78-201ENSMUST00000164932 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd28P31041 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Gm7052-201ENSMUST00000167568 1512 ntBASIC9.1□□□□□ -0.95
Cd28P31041 Mkl1-203ENSMUST00000131235 4222 ntTSL 5 BASIC9.1□□□□□ -0.95
Cd28P31041 Celf2-211ENSMUST00000142941 2338 ntTSL 5 BASIC9.1□□□□□ -0.95
Cd28P31041 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Gm5099-201ENSMUST00000194892 1848 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Fut10-204ENSMUST00000161788 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Ano1-203ENSMUST00000121758 4552 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Rrh-202ENSMUST00000171313 1759 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Pigq-202ENSMUST00000097368 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Sap130-202ENSMUST00000178164 4030 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Cd28P31041 Six6-201ENSMUST00000021519 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Cdc42bpa-203ENSMUST00000097453 6704 ntTSL 5 BASIC9.1□□□□□ -0.95
Cd28P31041 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Cd28P31041 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cd28P31041 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Cd28P31041 Mir877-201ENSMUST00000104738 85 ntBASIC9.1□□□□□ -0.95
Cd28P31041 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Cd28P31041 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Gm12165-201ENSMUST00000117047 342 ntBASIC9.1□□□□□ -0.95
Cd28P31041 Gm12194-201ENSMUST00000117756 1012 ntBASIC9.1□□□□□ -0.95
Cd28P31041 Gm15573-201ENSMUST00000119487 540 ntBASIC9.1□□□□□ -0.95
Cd28P31041 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC9.1□□□□□ -0.95
Cd28P31041 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.1□□□□□ -0.95
Cd28P31041 Gm8197-202ENSMUST00000193422 934 ntBASIC9.1□□□□□ -0.95
Cd28P31041 AC164618.2-201ENSMUST00000224770 573 ntBASIC9.1□□□□□ -0.95
Cd28P31041 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Gm7589-201ENSMUST00000085631 534 ntBASIC9.1□□□□□ -0.95
Cd28P31041 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Ank3-237ENSMUST00000183074 4948 ntTSL 5 BASIC9.1□□□□□ -0.95
Cd28P31041 Pear1-202ENSMUST00000079083 4297 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cd28P31041 Sncaip-201ENSMUST00000025413 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd28P31041 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Cd28P31041 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms