Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Mbtd1-206ENSMUST00000107854 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Gm13254-201ENSMUST00000118295 654 ntBASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Gm14182-201ENSMUST00000119334 210 ntBASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Gm13413-201ENSMUST00000120953 602 ntBASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Gm12696-201ENSMUST00000122361 905 ntBASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 BC049715-202ENSMUST00000163640 744 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Rit1-207ENSMUST00000172252 820 ntTSL 3 BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Gm20508-201ENSMUST00000172480 487 ntTSL 2 BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Ly6c1-205ENSMUST00000187347 522 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Gm37232-201ENSMUST00000194887 367 ntBASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Gm18894-201ENSMUST00000198794 694 ntBASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Gm34358-201ENSMUST00000204585 665 ntTSL 3 BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Gm32858-201ENSMUST00000205246 585 ntBASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Gm39128-201ENSMUST00000208237 1094 ntTSL 5 BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Fkbp3-202ENSMUST00000220730 579 ntTSL 5 BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 CT025603.2-201ENSMUST00000224369 484 ntBASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Snapc5-201ENSMUST00000034965 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Cbx1-203ENSMUST00000093943 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Them7-201ENSMUST00000068813 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Snap25-201ENSMUST00000028727 2116 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Gm32255-201ENSMUST00000219456 1349 ntBASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Gm20501-202ENSMUST00000211303 2194 ntBASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ccdc188F6WEU2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Cab39l-206ENSMUST00000225595 1380 ntBASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Spz1-201ENSMUST00000050658 1537 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Chad-201ENSMUST00000040418 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Gm6341-201ENSMUST00000119683 411 ntBASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Gm12376-201ENSMUST00000120538 607 ntBASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Gm14010-201ENSMUST00000131961 374 ntTSL 2 BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Gm36973-201ENSMUST00000193942 259 ntBASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Gm8992-201ENSMUST00000204463 502 ntBASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Gm44978-201ENSMUST00000206635 317 ntBASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 AC122354.1-201ENSMUST00000222328 702 ntTSL 5 BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 AC157650.1-201ENSMUST00000224582 610 ntBASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Hprt-201ENSMUST00000026723 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Llcfc1-201ENSMUST00000031900 741 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Pfkfb3-216ENSMUST00000191668 2216 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Gm42731-201ENSMUST00000201839 1641 ntBASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Ccdc188F6WEU2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms