Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Gm36957-201ENSMUST00000192982 2824 ntBASIC9.87□□□□□ -0.83
Clrn1Q8K445 4932430I15Rik-201ENSMUST00000180431 3306 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC9.87□□□□□ -0.83
Clrn1Q8K445 Gm15136-201ENSMUST00000120552 533 ntBASIC9.87□□□□□ -0.83
Clrn1Q8K445 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Gm26208-201ENSMUST00000158677 124 ntBASIC9.87□□□□□ -0.83
Clrn1Q8K445 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Gm5274-201ENSMUST00000182641 1003 ntBASIC9.87□□□□□ -0.83
Clrn1Q8K445 Gm43564-201ENSMUST00000196185 211 ntBASIC9.87□□□□□ -0.83
Clrn1Q8K445 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Gm3433-201ENSMUST00000210149 1058 ntBASIC9.87□□□□□ -0.83
Clrn1Q8K445 Gm45308-201ENSMUST00000210610 415 ntBASIC9.87□□□□□ -0.83
Clrn1Q8K445 Gm5189-201ENSMUST00000221796 261 ntBASIC9.87□□□□□ -0.83
Clrn1Q8K445 AC154806.7-201ENSMUST00000227998 202 ntBASIC9.87□□□□□ -0.83
Clrn1Q8K445 Gm4604-201ENSMUST00000025040 390 ntBASIC9.87□□□□□ -0.83
Clrn1Q8K445 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Gm8016-201ENSMUST00000221830 1575 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Tpp2-207ENSMUST00000188313 4631 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Gm16576-201ENSMUST00000128342 5404 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC9.87□□□□□ -0.83
Clrn1Q8K445 Adamts4-203ENSMUST00000219033 4386 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Gm15604-201ENSMUST00000118350 1456 ntBASIC9.86□□□□□ -0.83
Clrn1Q8K445 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Foxm1-201ENSMUST00000073316 4652 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Lpin1-201ENSMUST00000067124 5581 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Copa-206ENSMUST00000135192 4622 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Gm15285-201ENSMUST00000119271 473 ntBASIC9.86□□□□□ -0.83
Clrn1Q8K445 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC9.86□□□□□ -0.83
Clrn1Q8K445 Gm15519-201ENSMUST00000120088 1566 ntBASIC9.86□□□□□ -0.83
Clrn1Q8K445 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Gm16547-201ENSMUST00000159474 293 ntBASIC9.86□□□□□ -0.83
Clrn1Q8K445 Gm26272-201ENSMUST00000179241 132 ntBASIC9.86□□□□□ -0.83
Clrn1Q8K445 Mir8111-201ENSMUST00000184463 137 ntBASIC9.86□□□□□ -0.83
Clrn1Q8K445 Gm42430-201ENSMUST00000197209 616 ntBASIC9.86□□□□□ -0.83
Clrn1Q8K445 Gm42751-201ENSMUST00000198065 559 ntBASIC9.86□□□□□ -0.83
Clrn1Q8K445 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Dzank1-201ENSMUST00000081982 6847 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Gm12799-201ENSMUST00000118151 2560 ntBASIC9.86□□□□□ -0.83
Clrn1Q8K445 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC9.86□□□□□ -0.83
Clrn1Q8K445 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 CT010480.4-201ENSMUST00000224654 2283 ntBASIC9.85□□□□□ -0.83
Clrn1Q8K445 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Clrn1Q8K445 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms