Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 AC102327.1-201ENSMUST00000226389 742 ntBASIC14.3□□□□□ -0.12
Usp40Q8BWR4 AC156016.4-201ENSMUST00000227470 647 ntBASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Gm20953-201ENSMUST00000216399 2614 ntBASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Usp40Q8BWR4 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Gm36987-201ENSMUST00000194704 2979 ntBASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Gm11540-201ENSMUST00000117457 780 ntBASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Gm13002-201ENSMUST00000119286 682 ntBASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Gm8464-202ENSMUST00000146697 1142 ntBASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Gm4750-201ENSMUST00000151942 1142 ntBASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Gm24352-201ENSMUST00000158966 125 ntBASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Gm37921-201ENSMUST00000194333 695 ntBASIC14.29□□□□□ -0.12
Usp40Q8BWR4 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC14.29□□□□□ -0.12
Usp40Q8BWR4 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC14.29□□□□□ -0.12
Usp40Q8BWR4 AC156274.1-201ENSMUST00000219193 634 ntBASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 AC154433.1-201ENSMUST00000224401 1183 ntBASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Zfp948-201ENSMUST00000088787 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Gm15599-201ENSMUST00000122283 1345 ntBASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Gm45728-201ENSMUST00000211475 2979 ntBASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 C8b-202ENSMUST00000065072 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Gm17644-201ENSMUST00000181272 3200 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Ttll2-201ENSMUST00000115747 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Gm43817-201ENSMUST00000196459 2262 ntBASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Harbi1-201ENSMUST00000090608 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp40Q8BWR4 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Gm25723-201ENSMUST00000104530 126 ntBASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Gm44805-201ENSMUST00000127648 765 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Gm7583-201ENSMUST00000182941 1005 ntBASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Gm19058-201ENSMUST00000192135 598 ntBASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Gm5310-201ENSMUST00000197861 1511 ntBASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Gm34248-201ENSMUST00000200027 474 ntBASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Wdr20rt-202ENSMUST00000221658 1570 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 CT009713.3-201ENSMUST00000224987 1565 ntBASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Vgll3-202ENSMUST00000227997 1383 ntBASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Ribc1-201ENSMUST00000026288 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC14.28□□□□□ -0.12
Usp40Q8BWR4 Pcgf5-202ENSMUST00000071267 1508 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 163.6 ms