Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm37688-201ENSMUST00000195195 465 ntBASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC12.52□□□□□ -0.4
Vps54Q5SPW0 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vps54Q5SPW0 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Vps54Q5SPW0 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vps54Q5SPW0 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC12.52□□□□□ -0.4
Vps54Q5SPW0 AC154186.1-201ENSMUST00000227711 1597 ntBASIC12.52□□□□□ -0.4
Vps54Q5SPW0 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Vps54Q5SPW0 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vps54Q5SPW0 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vps54Q5SPW0 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vps54Q5SPW0 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vps54Q5SPW0 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vps54Q5SPW0 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vps54Q5SPW0 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 AC154171.2-201ENSMUST00000225219 2652 ntBASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Gm38111-201ENSMUST00000194817 2741 ntBASIC12.52□□□□□ -0.41
Vps54Q5SPW0 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Gm14148-201ENSMUST00000122433 1008 ntBASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Gm9204-201ENSMUST00000212641 947 ntBASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Gm10406-201ENSMUST00000100895 1813 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Vps54Q5SPW0 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.52□□□□□ -0.41
Vps54Q5SPW0 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Slc17a3-203ENSMUST00000110422 1764 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Gm5703-201ENSMUST00000186658 3973 ntBASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Gm22495-201ENSMUST00000104492 126 ntBASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Gm12418-201ENSMUST00000118116 942 ntBASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Gm16209-201ENSMUST00000118457 627 ntBASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Gm10171-201ENSMUST00000126220 628 ntBASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Gm37944-201ENSMUST00000194233 414 ntBASIC12.51□□□□□ -0.41
Vps54Q5SPW0 AC138716.2-201ENSMUST00000226670 1016 ntBASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Gm5278-201ENSMUST00000055957 552 ntBASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Gm10233-201ENSMUST00000089275 628 ntBASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Gm8848-201ENSMUST00000197270 1343 ntBASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Vps54Q5SPW0 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms