Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Gm11952-201ENSMUST00000121172 821 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm11993-201ENSMUST00000121861 820 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm16165-201ENSMUST00000160140 795 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Mipep-ps-201ENSMUST00000177439 291 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm5808-201ENSMUST00000178090 357 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC8.78□□□□□ -1
Usf3B2RUQ2 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm20568-201ENSMUST00000197129 208 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm5650-201ENSMUST00000209641 598 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 AC122024.3-201ENSMUST00000217719 294 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC8.78□□□□□ -1
Usf3B2RUQ2 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm7589-201ENSMUST00000085631 534 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Usf3B2RUQ2 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Usf3B2RUQ2 AC166361.2-201ENSMUST00000219269 1415 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Usf3B2RUQ2 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Usf3B2RUQ2 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC8.78□□□□□ -1
Usf3B2RUQ2 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm44445-201ENSMUST00000204075 2683 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Mfsd4a-201ENSMUST00000046658 3252 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC8.78□□□□□ -1
Usf3B2RUQ2 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC8.78□□□□□ -1
Usf3B2RUQ2 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm15626-201ENSMUST00000117478 868 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm16209-201ENSMUST00000118457 627 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm10171-201ENSMUST00000126220 628 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 n-R5s130-201ENSMUST00000178128 119 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm24312-201ENSMUST00000178677 119 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 n-R5s106-201ENSMUST00000179060 119 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 n-R5s118-201ENSMUST00000179887 119 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm7765-201ENSMUST00000182585 974 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm38103-201ENSMUST00000191707 864 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC8.78□□□□□ -1
Usf3B2RUQ2 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC8.78□□□□□ -1
Usf3B2RUQ2 AC164429.1-201ENSMUST00000224210 518 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 AC137950.2-201ENSMUST00000227127 1089 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 AC154213.1-201ENSMUST00000228234 583 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm10233-201ENSMUST00000089275 628 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm42974-201ENSMUST00000199556 2654 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Spata33-207ENSMUST00000212760 4074 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC8.78□□□□□ -1
Usf3B2RUQ2 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC8.78□□□□□ -1
Usf3B2RUQ2 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Usf3B2RUQ2 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Usf3B2RUQ2 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC8.78□□□□□ -1
Usf3B2RUQ2 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Usf3B2RUQ2 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC8.78□□□□□ -1
Usf3B2RUQ2 AC151836.1-201ENSMUST00000228730 1637 ntBASIC8.78□□□□□ -1
Usf3B2RUQ2 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Usf3B2RUQ2 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1
Usf3B2RUQ2 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Usf3B2RUQ2 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1
Usf3B2RUQ2 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC8.77□□□□□ -1
Usf3B2RUQ2 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
Usf3B2RUQ2 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC8.77□□□□□ -1
Usf3B2RUQ2 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
Usf3B2RUQ2 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC8.77□□□□□ -1.01
Usf3B2RUQ2 Gm15264-201ENSMUST00000118050 502 ntBASIC8.77□□□□□ -1.01
Usf3B2RUQ2 Gm1826-201ENSMUST00000118646 1162 ntBASIC8.77□□□□□ -1.01
Usf3B2RUQ2 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC8.77□□□□□ -1.01
Usf3B2RUQ2 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Usf3B2RUQ2 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Usf3B2RUQ2 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Usf3B2RUQ2 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Usf3B2RUQ2 Mir6359-201ENSMUST00000183668 81 ntBASIC8.77□□□□□ -1.01
Usf3B2RUQ2 Kif4-ps-202ENSMUST00000185083 652 ntBASIC8.77□□□□□ -1.01
Usf3B2RUQ2 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Usf3B2RUQ2 Gm18001-201ENSMUST00000212023 688 ntBASIC8.77□□□□□ -1.01
Usf3B2RUQ2 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms