Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trim13Q9CYB0 Smg7-202ENSMUST00000073441 5767 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trim13Q9CYB0 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trim13Q9CYB0 Gm37583-201ENSMUST00000195460 2487 ntBASIC9.71□□□□□ -0.85
Trim13Q9CYB0 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trim13Q9CYB0 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm9062-201ENSMUST00000117712 727 ntBASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm13045-201ENSMUST00000119019 712 ntBASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm15554-201ENSMUST00000120406 913 ntBASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm4654-201ENSMUST00000183305 982 ntBASIC9.71□□□□□ -0.86
Trim13Q9CYB0 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm7047-201ENSMUST00000196224 1063 ntBASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm43378-201ENSMUST00000199336 582 ntBASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm19540-201ENSMUST00000221843 810 ntBASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Spcs1-203ENSMUST00000226374 592 ntBASIC9.71□□□□□ -0.86
Trim13Q9CYB0 CT025679.1-201ENSMUST00000227106 449 ntBASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Ginm1-202ENSMUST00000065124 300 ntBASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm6641-201ENSMUST00000196100 1315 ntBASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm42941-201ENSMUST00000200347 1321 ntBASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Crispld2-203ENSMUST00000132583 4182 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Trip12-207ENSMUST00000186648 6442 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 CT025639.2-202ENSMUST00000225298 1630 ntBASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trim13Q9CYB0 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Dido1-205ENSMUST00000103056 4281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Klhl1-201ENSMUST00000022666 6645 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Rsf1-201ENSMUST00000107153 11124 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Gm14579-201ENSMUST00000117068 283 ntBASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Gm16518-201ENSMUST00000117960 508 ntBASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Gm12856-201ENSMUST00000119471 1293 ntBASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Gm26736-201ENSMUST00000180425 1236 ntBASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Gm18753-201ENSMUST00000201000 566 ntBASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Gm5599-201ENSMUST00000209602 788 ntBASIC9.7□□□□□ -0.86
Trim13Q9CYB0 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 CT010506.1-201ENSMUST00000223673 349 ntBASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Nsd1-205ENSMUST00000224693 852 ntBASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Gm7405-201ENSMUST00000121476 1337 ntBASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Gm19027-201ENSMUST00000187291 1355 ntBASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Trim13Q9CYB0 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms