Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.77□□□□□ -0.52
Smc1aQ9CU62 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smc1aQ9CU62 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Gm43249-201ENSMUST00000200464 458 ntBASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.77□□□□□ -0.53
Smc1aQ9CU62 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.77□□□□□ -0.53
Smc1aQ9CU62 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.77□□□□□ -0.53
Smc1aQ9CU62 CT030652.1-201ENSMUST00000227377 1235 ntBASIC11.77□□□□□ -0.53
Smc1aQ9CU62 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Itga7-202ENSMUST00000218290 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.77□□□□□ -0.53
Smc1aQ9CU62 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smc1aQ9CU62 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Phtf1os-201ENSMUST00000160110 4046 ntBASIC11.76□□□□□ -0.53
Smc1aQ9CU62 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 AC156802.2-203ENSMUST00000226032 1906 ntBASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Gm23061-201ENSMUST00000102348 116 ntBASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Gm4917-201ENSMUST00000121452 650 ntBASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Gm25226-201ENSMUST00000158198 123 ntBASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Gm31274-201ENSMUST00000197356 229 ntBASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Gm43610-201ENSMUST00000199117 365 ntBASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Gm5340-201ENSMUST00000203733 880 ntBASIC11.76□□□□□ -0.53
Smc1aQ9CU62 AC137950.2-201ENSMUST00000227127 1089 ntBASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smc1aQ9CU62 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Gm24328-201ENSMUST00000175104 67 ntBASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Gm37782-201ENSMUST00000194879 678 ntBASIC11.75□□□□□ -0.53
Smc1aQ9CU62 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Gm42867-201ENSMUST00000202995 469 ntBASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Gm9791-201ENSMUST00000060997 447 ntBASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smc1aQ9CU62 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms