Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Elmo3-201ENSMUST00000109375 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Gm11980-201ENSMUST00000121445 986 ntBASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Gm16288-201ENSMUST00000137940 367 ntBASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC10.38□□□□□ -0.75
Pcdhga4Q91XY4 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Fermt1-201ENSMUST00000038280 4915 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Gm11801-201ENSMUST00000117807 746 ntBASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Gm13549-201ENSMUST00000118339 796 ntBASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Gm13981-201ENSMUST00000122360 447 ntBASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Gm17070-201ENSMUST00000170463 784 ntBASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Gm18733-202ENSMUST00000174447 401 ntBASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Gm37852-201ENSMUST00000193027 350 ntBASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Gm37723-201ENSMUST00000194480 565 ntBASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Gm42751-201ENSMUST00000198065 559 ntBASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Traip-201ENSMUST00000049348 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Gm44103-201ENSMUST00000204364 3662 ntBASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdhga4Q91XY4 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pcdhga4Q91XY4 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms