Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Drc3-201ENSMUST00000070805 2061 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC10.78□□□□□ -0.68
Trub1Q8C0D0 Gm10093-201ENSMUST00000079363 1977 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
Trub1Q8C0D0 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.77□□□□□ -0.68
Trub1Q8C0D0 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trub1Q8C0D0 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trub1Q8C0D0 Camk2g-202ENSMUST00000080440 3604 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trub1Q8C0D0 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Trub1Q8C0D0 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
Trub1Q8C0D0 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.68
Trub1Q8C0D0 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Blnk-201ENSMUST00000054769 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Gm28578-203ENSMUST00000189196 1470 ntTSL 5 BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Ighv5-8-202ENSMUST00000191967 337 ntBASIC10.77□□□□□ -0.69
Trub1Q8C0D0 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Gm3028-201ENSMUST00000213805 1119 ntBASIC10.77□□□□□ -0.69
Trub1Q8C0D0 CT030195.2-201ENSMUST00000226074 1286 ntBASIC10.77□□□□□ -0.69
Trub1Q8C0D0 AC130477.1-201ENSMUST00000226982 420 ntBASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Gm43307-201ENSMUST00000199465 2371 ntBASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 AC154186.1-201ENSMUST00000227711 1597 ntBASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Gm12716-201ENSMUST00000120606 1354 ntBASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trub1Q8C0D0 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Cers3-201ENSMUST00000066475 3250 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 AC124426.1-201ENSMUST00000220871 2707 ntTSL 2 BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Nrap-205ENSMUST00000167239 4752 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Gm23612-201ENSMUST00000103823 110 ntBASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Gm1826-201ENSMUST00000118646 1162 ntBASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Gm11701-201ENSMUST00000121277 1142 ntBASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Gm15196-201ENSMUST00000121406 482 ntBASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Gm11354-201ENSMUST00000121974 422 ntBASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Gm11988-201ENSMUST00000122321 1069 ntBASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Gm25288-201ENSMUST00000122800 265 ntBASIC10.76□□□□□ -0.69
Trub1Q8C0D0 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Gm16033-201ENSMUST00000144915 596 ntTSL 5 BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Gm23576-201ENSMUST00000179918 110 ntBASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Gm29157-201ENSMUST00000188753 612 ntBASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 AC134860.2-201ENSMUST00000225277 1036 ntBASIC10.76□□□□□ -0.69
Trub1Q8C0D0 A430093F15Rik-201ENSMUST00000087947 985 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trub1Q8C0D0 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms