Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Gm13094-201ENSMUST00000117930 409 ntBASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Mir1941-201ENSMUST00000157834 83 ntBASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC12.55□□□□□ -0.4
Vps54Q5SPW0 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.55□□□□□ -0.4
Vps54Q5SPW0 CT010505.2-201ENSMUST00000227918 998 ntBASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 AC126459.1-201ENSMUST00000214791 2123 ntBASIC12.55□□□□□ -0.4
Vps54Q5SPW0 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps54Q5SPW0 Gm13498-201ENSMUST00000119159 2166 ntBASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Efna1-201ENSMUST00000029566 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Slc6a12-201ENSMUST00000032200 2644 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Gm7583-201ENSMUST00000182941 1005 ntBASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Gm27953-201ENSMUST00000185171 143 ntBASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Gm28916-201ENSMUST00000186988 699 ntBASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Gm37207-201ENSMUST00000194284 296 ntBASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps54Q5SPW0 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Gm22751-201ENSMUST00000102077 109 ntBASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Mir692-3-201ENSMUST00000102079 109 ntBASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Mir692-2-201ENSMUST00000102081 109 ntBASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Ighv8-6-201ENSMUST00000103524 301 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Gm23769-201ENSMUST00000104441 121 ntBASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Gm6238-201ENSMUST00000120999 465 ntBASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Mir6360-201ENSMUST00000184278 126 ntBASIC12.53□□□□□ -0.4
Vps54Q5SPW0 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms