Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC9.31□□□□□ -0.92
P20040 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
P20040 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 n-R5s185-201ENSMUST00000083953 119 ntBASIC9.31□□□□□ -0.92
P20040 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
P20040 2810029C07Rik-201ENSMUST00000180698 1954 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC9.31□□□□□ -0.92
P20040 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 AC124561.1-202ENSMUST00000228652 1929 ntBASIC9.31□□□□□ -0.92
P20040 Gm7278-201ENSMUST00000119836 1401 ntBASIC9.31□□□□□ -0.92
P20040 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
P20040 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
P20040 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC9.3□□□□□ -0.92
P20040 Upp2-201ENSMUST00000059102 2498 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Diaph1-201ENSMUST00000025337 5596 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
P20040 Pla2g5-203ENSMUST00000102512 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
P20040 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
P20040 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC9.3□□□□□ -0.92
P20040 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Gm12628-201ENSMUST00000122193 382 ntBASIC9.3□□□□□ -0.92
P20040 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC9.3□□□□□ -0.92
P20040 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC9.3□□□□□ -0.92
P20040 Gm4812-201ENSMUST00000182847 993 ntBASIC9.3□□□□□ -0.92
P20040 Mir6958-201ENSMUST00000184207 73 ntBASIC9.3□□□□□ -0.92
P20040 Gm27953-201ENSMUST00000185171 143 ntBASIC9.3□□□□□ -0.92
P20040 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC9.3□□□□□ -0.92
P20040 Gm7525-201ENSMUST00000219425 454 ntBASIC9.3□□□□□ -0.92
P20040 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
P20040 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC9.3□□□□□ -0.92
P20040 AC158392.3-201ENSMUST00000224271 1284 ntBASIC9.3□□□□□ -0.92
P20040 CT025618.1-203ENSMUST00000227008 589 ntBASIC9.3□□□□□ -0.92
P20040 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
P20040 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Lrsam1-201ENSMUST00000028132 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC9.3□□□□□ -0.92
P20040 Gm8036-201ENSMUST00000118089 1718 ntBASIC9.3□□□□□ -0.92
P20040 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
P20040 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC9.3□□□□□ -0.92
P20040 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC9.3□□□□□ -0.92
P20040 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Oprm1-216ENSMUST00000105611 2420 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
P20040 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
P20040 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
P20040 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
P20040 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
P20040 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
P20040 Gm28624-201ENSMUST00000186430 2131 ntBASIC9.29□□□□□ -0.92
P20040 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
P20040 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Gm42815-201ENSMUST00000198787 1470 ntBASIC9.29□□□□□ -0.92
P20040 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
P20040 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.29□□□□□ -0.92
P20040 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC9.29□□□□□ -0.92
P20040 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms