Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Hoxd3P09027 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Anp32-ps-201ENSMUST00000118265 388 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm4993-201ENSMUST00000118719 1174 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm15754-201ENSMUST00000119191 478 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm12096-201ENSMUST00000121149 829 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Mir1905-201ENSMUST00000122779 82 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm24551-201ENSMUST00000158645 92 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm16030-201ENSMUST00000159098 603 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm3025-201ENSMUST00000163454 489 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm3077-201ENSMUST00000165903 627 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm2878-201ENSMUST00000170173 486 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm23617-201ENSMUST00000175410 95 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC8.59□□□□□ -1.03
Hoxd3P09027 1700125H20Rik-201ENSMUST00000018623 966 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm37214-201ENSMUST00000192860 916 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm7631-201ENSMUST00000196935 1100 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC8.59□□□□□ -1.03
Hoxd3P09027 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm18059-201ENSMUST00000208073 580 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm44700-201ENSMUST00000208228 846 ntTSL 3 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm45437-202ENSMUST00000211418 694 ntTSL 3 BASIC8.59□□□□□ -1.03
Hoxd3P09027 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Id2-203ENSMUST00000222667 958 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 AC129975.1-201ENSMUST00000224816 592 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 AC174797.2-202ENSMUST00000225729 568 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 AC170810.2-201ENSMUST00000228384 1232 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Hoxd3P09027 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Hoxd3P09027 n-R5s185-201ENSMUST00000083953 119 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm44106-201ENSMUST00000203153 1599 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm5822-201ENSMUST00000161562 1378 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 AC109214.1-201ENSMUST00000219520 1372 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Gpr33-201ENSMUST00000040161 1388 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Hoxd3P09027 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC8.59□□□□□ -1.03
Hoxd3P09027 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hoxd3P09027 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.04
Hoxd3P09027 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Hoxd3P09027 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Hoxd3P09027 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Hoxd3P09027 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Hoxd3P09027 Gm31463-201ENSMUST00000208799 1479 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Hoxd3P09027 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Hoxd3P09027 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Hoxd3P09027 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Hoxd3P09027 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Hoxd3P09027 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Hoxd3P09027 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC8.58□□□□□ -1.04
Hoxd3P09027 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Hoxd3P09027 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Hoxd3P09027 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Hoxd3P09027 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Hoxd3P09027 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Hoxd3P09027 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Hoxd3P09027 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Hoxd3P09027 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Hoxd3P09027 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC8.58□□□□□ -1.04
Hoxd3P09027 Gm25880-201ENSMUST00000104331 132 ntBASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms