Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 AC153961.1-201ENSMUST00000217760 385 ntBASIC11.14□□□□□ -0.63
Itgb3O54890 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC11.14□□□□□ -0.63
Itgb3O54890 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC11.14□□□□□ -0.63
Itgb3O54890 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Itgb3O54890 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC11.14□□□□□ -0.63
Itgb3O54890 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Itgb3O54890 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Itgb3O54890 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Itgb3O54890 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Itgb3O54890 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Itgb3O54890 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Itgb3O54890 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Itgb3O54890 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Itgb3O54890 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Gm45663-201ENSMUST00000210429 1632 ntBASIC11.13□□□□□ -0.63
Itgb3O54890 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Itgb3O54890 Gm8873-201ENSMUST00000217847 1439 ntBASIC11.13□□□□□ -0.63
Itgb3O54890 Gm22495-201ENSMUST00000104492 126 ntBASIC11.13□□□□□ -0.63
Itgb3O54890 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Itgb3O54890 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC11.13□□□□□ -0.63
Itgb3O54890 Gm15258-201ENSMUST00000153801 741 ntBASIC11.13□□□□□ -0.63
Itgb3O54890 Ubl5-203ENSMUST00000160124 501 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Itgb3O54890 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC11.13□□□□□ -0.63
Itgb3O54890 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC11.13□□□□□ -0.63
Itgb3O54890 Gm37197-201ENSMUST00000195607 401 ntBASIC11.13□□□□□ -0.63
Itgb3O54890 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC11.13□□□□□ -0.63
Itgb3O54890 Gm43821-201ENSMUST00000199198 729 ntTSL 3 BASIC11.13□□□□□ -0.63
Itgb3O54890 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Gm3318-201ENSMUST00000217604 1183 ntBASIC11.13□□□□□ -0.63
Itgb3O54890 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC11.13□□□□□ -0.63
Itgb3O54890 AC149294.3-201ENSMUST00000226888 732 ntBASIC11.13□□□□□ -0.63
Itgb3O54890 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.13□□□□□ -0.63
Itgb3O54890 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.13□□□□□ -0.63
Itgb3O54890 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.13□□□□□ -0.63
Itgb3O54890 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Zfp474-201ENSMUST00000072666 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Gm44913-201ENSMUST00000208060 2990 ntBASIC11.13□□□□□ -0.63
Itgb3O54890 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Itgb3O54890 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Itgb3O54890 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Itgb3O54890 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Itgb3O54890 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC11.12□□□□□ -0.63
Itgb3O54890 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Itgb3O54890 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Itgb3O54890 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
Itgb3O54890 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Itgb3O54890 Gm38034-201ENSMUST00000193915 2069 ntBASIC11.12□□□□□ -0.63
Itgb3O54890 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Itgb3O54890 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Itgb3O54890 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Itgb3O54890 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Itgb3O54890 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Itgb3O54890 Snora68-201ENSMUST00000104375 131 ntBASIC11.12□□□□□ -0.63
Itgb3O54890 Gm23769-201ENSMUST00000104441 121 ntBASIC11.12□□□□□ -0.63
Itgb3O54890 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Itgb3O54890 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Itgb3O54890 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC11.12□□□□□ -0.63
Itgb3O54890 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Itgb3O54890 Gm23081-201ENSMUST00000157845 297 ntBASIC11.12□□□□□ -0.63
Itgb3O54890 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Itgb3O54890 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Itgb3O54890 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC11.12□□□□□ -0.63
Itgb3O54890 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC11.12□□□□□ -0.63
Itgb3O54890 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Itgb3O54890 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Itgb3O54890 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC11.12□□□□□ -0.63
Itgb3O54890 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Itgb3O54890 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Itgb3O54890 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Itgb3O54890 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC11.12□□□□□ -0.63
Itgb3O54890 Tbata-202ENSMUST00000079235 696 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Itgb3O54890 Gm42974-201ENSMUST00000199556 2654 ntBASIC11.12□□□□□ -0.63
Itgb3O54890 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Itgb3O54890 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Itgb3O54890 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Itgb3O54890 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms