Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Calr4-201ENSMUST00000030285 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ube4bQ9ES00 Zfp189-201ENSMUST00000042964 2835 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Ube4bQ9ES00 Rimbp2-207ENSMUST00000200470 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ube4bQ9ES00 Gpr85-202ENSMUST00000115491 2165 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Ube4bQ9ES00 Pear1-216ENSMUST00000174759 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ube4bQ9ES00 Pear1-202ENSMUST00000079083 4297 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Ube4bQ9ES00 Slc25a13-201ENSMUST00000015256 3067 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ube4bQ9ES00 Smim1-202ENSMUST00000126119 3996 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Ube4bQ9ES00 Galns-201ENSMUST00000015171 2557 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ube4bQ9ES00 Ttll8-201ENSMUST00000109371 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ube4bQ9ES00 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC10.02□□□□□ -0.81
Ube4bQ9ES00 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ube4bQ9ES00 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 4933422A05Rik-201ENSMUST00000213706 1356 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Baiap3-201ENSMUST00000169109 3630 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 4930571K23Rik-201ENSMUST00000166958 2153 ntBASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Gimap8-203ENSMUST00000203509 3138 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Ufsp2-201ENSMUST00000034051 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Tulp4-209ENSMUST00000149756 8784 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Gm35048-201ENSMUST00000192105 2802 ntBASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Kirrel3-208ENSMUST00000188933 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Ins2-202ENSMUST00000105930 583 ntTSL 3 BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Gm12247-201ENSMUST00000117585 670 ntBASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Gm7857-201ENSMUST00000117957 358 ntBASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Gm12407-201ENSMUST00000180219 324 ntBASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Gm8342-201ENSMUST00000209839 757 ntBASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.01□□□□□ -0.81
Ube4bQ9ES00 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Zfhx2-201ENSMUST00000036328 10397 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Gm7353-201ENSMUST00000069044 2866 ntBASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Tacc2-203ENSMUST00000084513 9029 ntAPPRIS P4 TSL 5 BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Ufl1-202ENSMUST00000102994 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Zfp54-201ENSMUST00000007884 2300 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Trim9-211ENSMUST00000223160 3574 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Mrpl47-201ENSMUST00000043966 3364 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Gm44067-201ENSMUST00000203350 2971 ntTSL 5 BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Ube4bQ9ES00 Prpf31-206ENSMUST00000179769 3125 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 Gm37608-201ENSMUST00000195696 1880 ntBASIC10□□□□□ -0.81
Ube4bQ9ES00 Sypl-202ENSMUST00000076698 4999 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 Tcp10b-201ENSMUST00000086787 2327 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
Ube4bQ9ES00 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10□□□□□ -0.81
Ube4bQ9ES00 Myl6-201ENSMUST00000164181 665 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10□□□□□ -0.81
Ube4bQ9ES00 Gm37444-201ENSMUST00000193605 439 ntBASIC10□□□□□ -0.81
Ube4bQ9ES00 Gm44506-201ENSMUST00000206278 965 ntBASIC10□□□□□ -0.81
Ube4bQ9ES00 Gm2253-201ENSMUST00000211775 414 ntBASIC10□□□□□ -0.81
Ube4bQ9ES00 Gm5369-201ENSMUST00000217499 588 ntBASIC10□□□□□ -0.81
Ube4bQ9ES00 Gm9111-201ENSMUST00000219394 709 ntBASIC10□□□□□ -0.81
Ube4bQ9ES00 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC10□□□□□ -0.81
Ube4bQ9ES00 Gm9785-201ENSMUST00000062642 1006 ntBASIC10□□□□□ -0.81
Ube4bQ9ES00 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10□□□□□ -0.81
Ube4bQ9ES00 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10□□□□□ -0.81
Ube4bQ9ES00 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Ube4bQ9ES00 Irf4-202ENSMUST00000110307 4761 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 Irf4-201ENSMUST00000021784 4764 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 Elmo1-201ENSMUST00000072519 5464 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 Gsdme-203ENSMUST00000165099 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 Gm37039-201ENSMUST00000193733 2485 ntBASIC10□□□□□ -0.81
Ube4bQ9ES00 Sox2ot-211ENSMUST00000197977 2970 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC10□□□□□ -0.81
Ube4bQ9ES00 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10□□□□□ -0.81
Ube4bQ9ES00 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 Pvt1-203ENSMUST00000181657 2798 ntTSL 5 BASIC10□□□□□ -0.81
Ube4bQ9ES00 Heatr4-201ENSMUST00000164935 3038 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Ube4bQ9ES00 Snrpd3-201ENSMUST00000020397 3036 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10□□□□□ -0.81
Ube4bQ9ES00 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 Ank3-237ENSMUST00000183074 4948 ntTSL 5 BASIC10□□□□□ -0.81
Ube4bQ9ES00 Rpa1-201ENSMUST00000000767 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Ube4bQ9ES00 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms