Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Ighv2-1-201ENSMUST00000170946 353 ntBASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Gm6352-201ENSMUST00000203583 1134 ntBASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 AC158986.2-201ENSMUST00000227487 618 ntBASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp2aQ9DB34 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Chmp2aQ9DB34 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Chmp2aQ9DB34 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.96□□□□□ -0.66
Chmp2aQ9DB34 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chmp2aQ9DB34 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chmp2aQ9DB34 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Chmp2aQ9DB34 4930539E08Rik-201ENSMUST00000062357 4597 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chmp2aQ9DB34 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Chmp2aQ9DB34 Celsr2-201ENSMUST00000090558 10598 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chmp2aQ9DB34 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chmp2aQ9DB34 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Chmp2aQ9DB34 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Chmp2aQ9DB34 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.96□□□□□ -0.66
Chmp2aQ9DB34 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Gm37160-201ENSMUST00000193081 1689 ntBASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Gm45719-201ENSMUST00000207954 1662 ntBASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Gm13600-201ENSMUST00000117949 744 ntBASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Gm11411-201ENSMUST00000117951 719 ntBASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Gm11824-201ENSMUST00000120191 846 ntBASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Gm15782-201ENSMUST00000121073 445 ntBASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Gm22344-201ENSMUST00000122642 278 ntBASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Gm4812-201ENSMUST00000182847 993 ntBASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 AC157650.1-201ENSMUST00000224582 610 ntBASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Ep400-210ENSMUST00000146458 3673 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Chmp2aQ9DB34 Gm15519-201ENSMUST00000120088 1566 ntBASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Gm29101-201ENSMUST00000188329 1471 ntBASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Gm11996-201ENSMUST00000117538 915 ntBASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Gm1826-201ENSMUST00000118646 1162 ntBASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Gm11340-201ENSMUST00000119226 412 ntBASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Gm12969-201ENSMUST00000120199 1004 ntBASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Gm11980-201ENSMUST00000121445 986 ntBASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Gm11354-201ENSMUST00000121974 422 ntBASIC10.94□□□□□ -0.66
Chmp2aQ9DB34 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms