Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Lmo4P61969 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Lmo4P61969 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
Lmo4P61969 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
Lmo4P61969 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Lmo4P61969 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
Lmo4P61969 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Lmo4P61969 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
Lmo4P61969 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Lmo4P61969 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Lmo4P61969 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
Lmo4P61969 AC125351.1-201ENSMUST00000221438 2223 ntBASIC8.48□□□□□ -1.05
Lmo4P61969 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Gm26953-209ENSMUST00000213051 2087 ntTSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
Lmo4P61969 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 H2-M10.4-201ENSMUST00000057502 1410 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Gm42463-201ENSMUST00000198041 4886 ntBASIC8.47□□□□□ -1.05
Lmo4P61969 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
Lmo4P61969 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Klrc2-202ENSMUST00000112057 1149 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Gm14571-201ENSMUST00000118292 570 ntBASIC8.47□□□□□ -1.05
Lmo4P61969 Gm15132-201ENSMUST00000118581 652 ntBASIC8.47□□□□□ -1.05
Lmo4P61969 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Gm16574-201ENSMUST00000159301 745 ntBASIC8.47□□□□□ -1.05
Lmo4P61969 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Gm17107-201ENSMUST00000170983 553 ntBASIC8.47□□□□□ -1.05
Lmo4P61969 Gm27826-201ENSMUST00000175282 255 ntBASIC8.47□□□□□ -1.05
Lmo4P61969 Gm7672-201ENSMUST00000180915 872 ntBASIC8.47□□□□□ -1.05
Lmo4P61969 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC8.47□□□□□ -1.05
Lmo4P61969 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC8.47□□□□□ -1.05
Lmo4P61969 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC8.47□□□□□ -1.05
Lmo4P61969 Gm17936-201ENSMUST00000199413 988 ntBASIC8.47□□□□□ -1.05
Lmo4P61969 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Gm44709-201ENSMUST00000207649 448 ntTSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Gm44908-201ENSMUST00000208610 266 ntBASIC8.47□□□□□ -1.05
Lmo4P61969 Gm45481-201ENSMUST00000209717 877 ntBASIC8.47□□□□□ -1.05
Lmo4P61969 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC8.47□□□□□ -1.05
Lmo4P61969 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC8.47□□□□□ -1.05
Lmo4P61969 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 AC124356.1-201ENSMUST00000221469 698 ntBASIC8.47□□□□□ -1.05
Lmo4P61969 AC242269.1-201ENSMUST00000227020 741 ntBASIC8.47□□□□□ -1.05
Lmo4P61969 Gm4883-201ENSMUST00000085702 528 ntBASIC8.47□□□□□ -1.05
Lmo4P61969 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Ttc23-203ENSMUST00000107471 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Phf21a-205ENSMUST00000111291 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 AC108416.1-201ENSMUST00000228755 1558 ntBASIC8.47□□□□□ -1.05
Lmo4P61969 Klk13-201ENSMUST00000066834 1809 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Ephb4-202ENSMUST00000111054 3784 ntTSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Lmo4P61969 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Lmo4P61969 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Lmo4P61969 Gm5174-201ENSMUST00000171131 1423 ntBASIC8.46□□□□□ -1.05
Lmo4P61969 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Lmo4P61969 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Lmo4P61969 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Lmo4P61969 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Lmo4P61969 Gm37031-201ENSMUST00000195487 2530 ntBASIC8.46□□□□□ -1.05
Lmo4P61969 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC8.46□□□□□ -1.05
Lmo4P61969 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Lmo4P61969 Gm15604-201ENSMUST00000118350 1456 ntBASIC8.46□□□□□ -1.05
Lmo4P61969 Gba-201ENSMUST00000077367 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms