Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 L1cam-201ENSMUST00000066576 4116 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
Hmgb3O54879 Xpo7-206ENSMUST00000228346 4491 ntBASIC8.6□□□□□ -1.03
Hmgb3O54879 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Arhgap45-203ENSMUST00000105373 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Upb1-201ENSMUST00000039925 3042 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Eif3c-201ENSMUST00000032992 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Gm21358-201ENSMUST00000191645 1659 ntBASIC8.6□□□□□ -1.03
Hmgb3O54879 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Gm24891-201ENSMUST00000104391 136 ntBASIC8.6□□□□□ -1.03
Hmgb3O54879 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC8.6□□□□□ -1.03
Hmgb3O54879 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC8.6□□□□□ -1.03
Hmgb3O54879 Gm11411-201ENSMUST00000117951 719 ntBASIC8.6□□□□□ -1.03
Hmgb3O54879 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC8.6□□□□□ -1.03
Hmgb3O54879 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC8.6□□□□□ -1.03
Hmgb3O54879 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC8.6□□□□□ -1.03
Hmgb3O54879 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC8.6□□□□□ -1.03
Hmgb3O54879 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC8.6□□□□□ -1.03
Hmgb3O54879 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC8.6□□□□□ -1.03
Hmgb3O54879 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Gm18367-201ENSMUST00000176139 600 ntBASIC8.6□□□□□ -1.03
Hmgb3O54879 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC8.6□□□□□ -1.03
Hmgb3O54879 Gm4812-201ENSMUST00000182847 993 ntBASIC8.6□□□□□ -1.03
Hmgb3O54879 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Hmgb3O54879 Gm5733-201ENSMUST00000190232 939 ntBASIC8.6□□□□□ -1.03
Hmgb3O54879 Ighv1-48-201ENSMUST00000191795 294 ntBASIC8.6□□□□□ -1.03
Hmgb3O54879 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC8.6□□□□□ -1.03
Hmgb3O54879 Gm44506-201ENSMUST00000206278 965 ntBASIC8.6□□□□□ -1.03
Hmgb3O54879 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC8.6□□□□□ -1.03
Hmgb3O54879 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Hmgb3O54879 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC8.6□□□□□ -1.03
Hmgb3O54879 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Hmgb3O54879 CT030170.2-201ENSMUST00000223267 126 ntBASIC8.6□□□□□ -1.03
Hmgb3O54879 Gm8385-201ENSMUST00000058999 643 ntBASIC8.6□□□□□ -1.03
Hmgb3O54879 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Hmgb3O54879 Gm12381-201ENSMUST00000126314 2186 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Shcbp1-201ENSMUST00000022945 2156 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Galnt1-201ENSMUST00000000430 3977 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Gm43052-201ENSMUST00000201451 1628 ntBASIC8.6□□□□□ -1.03
Hmgb3O54879 Tia1-202ENSMUST00000095753 4477 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Zfp111-201ENSMUST00000056683 3380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Mbnl1-203ENSMUST00000191747 4046 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Stau2-216ENSMUST00000162627 2773 ntTSL 5 BASIC8.6□□□□□ -1.03
Hmgb3O54879 Pnpla1-202ENSMUST00000114737 4483 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Hmgb3O54879 Pnpla1-201ENSMUST00000056866 4483 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Hmgb3O54879 Avil-203ENSMUST00000129173 2925 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
Hmgb3O54879 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC8.59□□□□□ -1.03
Hmgb3O54879 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Hmgb3O54879 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 Zfp112-201ENSMUST00000005413 3044 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Hmgb3O54879 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Hmgb3O54879 Specc1l-202ENSMUST00000105421 6632 ntTSL 5 BASIC8.59□□□□□ -1.03
Hmgb3O54879 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC8.59□□□□□ -1.03
Hmgb3O54879 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 Rab44-201ENSMUST00000087942 4109 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Hmgb3O54879 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 Sept6-201ENSMUST00000053456 4673 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 Glb1l2-202ENSMUST00000066560 3688 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 Alppl2-201ENSMUST00000027455 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 Gm15528-201ENSMUST00000117821 864 ntBASIC8.59□□□□□ -1.03
Hmgb3O54879 Gm14130-201ENSMUST00000118417 987 ntBASIC8.59□□□□□ -1.03
Hmgb3O54879 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC8.59□□□□□ -1.03
Hmgb3O54879 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC8.59□□□□□ -1.03
Hmgb3O54879 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC8.59□□□□□ -1.03
Hmgb3O54879 Gm23085-201ENSMUST00000157849 293 ntBASIC8.59□□□□□ -1.03
Hmgb3O54879 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC8.59□□□□□ -1.03
Hmgb3O54879 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC8.59□□□□□ -1.03
Hmgb3O54879 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC8.59□□□□□ -1.03
Hmgb3O54879 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC8.59□□□□□ -1.03
Hmgb3O54879 Gm44155-201ENSMUST00000203923 412 ntBASIC8.59□□□□□ -1.03
Hmgb3O54879 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC8.59□□□□□ -1.03
Hmgb3O54879 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC8.59□□□□□ -1.03
Hmgb3O54879 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC8.59□□□□□ -1.03
Hmgb3O54879 Gm2517-201ENSMUST00000215651 348 ntBASIC8.59□□□□□ -1.03
Hmgb3O54879 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 Gm18730-201ENSMUST00000218038 343 ntBASIC8.59□□□□□ -1.03
Hmgb3O54879 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC8.59□□□□□ -1.03
Hmgb3O54879 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Hmgb3O54879 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms