Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Gm4540-201ENSMUST00000170669 429 ntBASIC10.23□□□□□ -0.77
Otud1Q9CUB6 n-R5s130-201ENSMUST00000178128 119 ntBASIC10.23□□□□□ -0.77
Otud1Q9CUB6 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Gm24312-201ENSMUST00000178677 119 ntBASIC10.23□□□□□ -0.77
Otud1Q9CUB6 n-R5s106-201ENSMUST00000179060 119 ntBASIC10.23□□□□□ -0.77
Otud1Q9CUB6 n-R5s118-201ENSMUST00000179887 119 ntBASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Gm45401-201ENSMUST00000209456 733 ntBASIC10.23□□□□□ -0.77
Otud1Q9CUB6 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 AC161426.1-201ENSMUST00000214137 286 ntBASIC10.23□□□□□ -0.77
Otud1Q9CUB6 AC168279.1-201ENSMUST00000214611 382 ntBASIC10.23□□□□□ -0.77
Otud1Q9CUB6 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.23□□□□□ -0.77
Otud1Q9CUB6 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Otud1Q9CUB6 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Gm43771-201ENSMUST00000202931 1578 ntBASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Gm4806-201ENSMUST00000222704 1690 ntBASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Gm42858-201ENSMUST00000202512 1704 ntBASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Gm23612-201ENSMUST00000103823 110 ntBASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Gm26272-201ENSMUST00000179241 132 ntBASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Gm23576-201ENSMUST00000179918 110 ntBASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Gm19231-201ENSMUST00000193212 830 ntBASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Gm37005-201ENSMUST00000193281 1164 ntBASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.22□□□□□ -0.77
Otud1Q9CUB6 AC158392.1-201ENSMUST00000223720 1069 ntBASIC10.22□□□□□ -0.77
Otud1Q9CUB6 AC121567.1-201ENSMUST00000227213 842 ntBASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Gm42942-201ENSMUST00000196086 1328 ntBASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Gm44562-201ENSMUST00000207194 1347 ntBASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Otud1Q9CUB6 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 174.8 ms