Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC10.02□□□□□ -0.81
Cdx2P43241 Gm3687-201ENSMUST00000161710 460 ntBASIC10.02□□□□□ -0.81
Cdx2P43241 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC10.02□□□□□ -0.81
Cdx2P43241 Rergl-201ENSMUST00000170650 958 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC10.02□□□□□ -0.81
Cdx2P43241 Gm7812-201ENSMUST00000203479 874 ntBASIC10.02□□□□□ -0.81
Cdx2P43241 Gm44173-201ENSMUST00000204316 132 ntBASIC10.02□□□□□ -0.81
Cdx2P43241 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC10.02□□□□□ -0.81
Cdx2P43241 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Cdx2P43241 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Cdx2P43241 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.02□□□□□ -0.81
Cdx2P43241 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC10.02□□□□□ -0.81
Cdx2P43241 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Cdx2P43241 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.02□□□□□ -0.81
Cdx2P43241 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Cdx2P43241 Gm8848-201ENSMUST00000197270 1343 ntBASIC10.02□□□□□ -0.81
Cdx2P43241 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Cdx2P43241 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx2P43241 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Cdx2P43241 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Cdx2P43241 Ankrd36-201ENSMUST00000109855 1363 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.01□□□□□ -0.81
Cdx2P43241 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.01□□□□□ -0.81
Cdx2P43241 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Cdx2P43241 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Gm16439-201ENSMUST00000100687 564 ntBASIC10.01□□□□□ -0.81
Cdx2P43241 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Cdx2P43241 Zbp1-202ENSMUST00000109116 770 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC10.01□□□□□ -0.81
Cdx2P43241 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC10.01□□□□□ -0.81
Cdx2P43241 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Cdx2P43241 Gm13758-201ENSMUST00000118699 743 ntBASIC10.01□□□□□ -0.81
Cdx2P43241 Gm12420-201ENSMUST00000119869 1048 ntBASIC10.01□□□□□ -0.81
Cdx2P43241 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC10.01□□□□□ -0.81
Cdx2P43241 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC10.01□□□□□ -0.81
Cdx2P43241 Gm30652-201ENSMUST00000199103 430 ntBASIC10.01□□□□□ -0.81
Cdx2P43241 AC100406.1-201ENSMUST00000217305 480 ntBASIC10.01□□□□□ -0.81
Cdx2P43241 AC157650.1-201ENSMUST00000224582 610 ntBASIC10.01□□□□□ -0.81
Cdx2P43241 CT025547.1-201ENSMUST00000225127 578 ntBASIC10.01□□□□□ -0.81
Cdx2P43241 Nmb-201ENSMUST00000026817 705 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.01□□□□□ -0.81
Cdx2P43241 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 Gm44664-201ENSMUST00000206841 1786 ntBASIC10.01□□□□□ -0.81
Cdx2P43241 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx2P43241 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC10.01□□□□□ -0.81
Cdx2P43241 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Cdx2P43241 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdx2P43241 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Cdx2P43241 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Cdx2P43241 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Cdx2P43241 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Cdx2P43241 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10□□□□□ -0.81
Cdx2P43241 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdx2P43241 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdx2P43241 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
Cdx2P43241 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdx2P43241 Gm43052-201ENSMUST00000201451 1628 ntBASIC10□□□□□ -0.81
Cdx2P43241 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdx2P43241 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdx2P43241 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdx2P43241 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cdx2P43241 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10□□□□□ -0.81
Cdx2P43241 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cdx2P43241 Gm21136-201ENSMUST00000186812 2575 ntBASIC10□□□□□ -0.81
Cdx2P43241 Gm6605-201ENSMUST00000031488 2574 ntBASIC10□□□□□ -0.81
Cdx2P43241 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms